Van Oudenaarden Lab:C13G5.1
Progress:
Probes designed: (02-28-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>C13G5.1 (ceh-16 spliced coding region + 5'-UTR)
atggacgatgagggggagtttgtgttgtatctccgttcactgaccggttaatcagtgaggtgctactcgtttttttcttt gtttgagaattaatgttgatcaacaatacttaggtgaacatttgaattaatggcattttacccaaagtttcgaactcgaa tatcctattttactggggttttgcactattttccatttattgtaaattcattttatttattttttcagaa
atgattctgaaattcggtattgaacgaatcctgtcttccccctacccttgcccatctccaactatttcaactcctgctac aagtccatcaagtatttctcctacttttgcatctccaaatggaacaccaaatattgcgtcaagtatgtatcctgcatggg tgttcagcacaagatattccgatcgaccatctgcaggccctcgacatcgaaaatcccgaaaacgagaatcaactggaagt agtggaagttcagaagaagaaaaaagaccacgtactgcattcactggagatcaattggaccggctcaaaactgaattccg ggaaagcagatatctaacagaaaagcggcgacaagaattggctcacgagctcggactcaacgaatcgcagatcaaaatct ggttccagaacaagcgtgccaaactcaaaaagtcgacatcttctgttccaagagatcgatgctcctccgtcactccaaat cctcataatcatccgtcaattcatggaggatatcaacttatggctcagttggcaaaggttcaggctcgagcttacatgcc atga
Name of probe set: ceh-16
Probes designed on Sun, 28 Feb 10 19:02:36 -0700
36 probes designed for target of length 794 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
aactccccctcatcgtccat, ceh-16_1, 1, 1, 55
cagtgaacggagatacaaca, ceh-16_2, 2, 23, 45
tagcacctcactgattaacc, ceh-16_3, 3, 46, 45
ctcaaacaaagaaaaaaacg, ceh-16_4, 4, 68, 30
gtattgttgatcaacattaa, ceh-16_5, 5, 90, 25
attaattcaaatgttcacct, ceh-16_6, 6, 112, 25
tcgaaactttgggtaaaatg, ceh-16_7, 7, 134, 35
cagtaaaataggatattcga, ceh-16_8, 8, 156, 30
aatggaaaatagtgcaaaac, ceh-16_9, 9, 178, 30
taaataaaatgaatttacaa, ceh-16_10, 10, 200, 10
ttcagaatcatttctgaaaa, ceh-16_11, 11, 222, 25
caggattcgttcaataccga, ceh-16_12, 12, 244, 45
atgggcaagggtagggggaa, ceh-16_13, 13, 266, 60
gcaggagttgaaatagttgg, ceh-16_14, 14, 288, 45
agaaatacttgatggacttg, ceh-16_15, 15, 310, 35
catttggagatgcaaaagta, ceh-16_16, 16, 332, 35
cttgacgcaatatttggtgt, ceh-16_17, 17, 354, 40
gaacacccatgcaggataca, ceh-16_18, 18, 376, 50
gtcgatcggaatatcttgtg, ceh-16_19, 19, 398, 45
cgatgtcgagggcctgcaga, ceh-16_20, 20, 420, 65
tgattctcgttttcgggatt, ceh-16_21, 21, 442, 40
ctgaacttccactacttcca, ceh-16_22, 22, 464, 45
gtacgtggtcttttttcttc, ceh-16_23, 23, 486, 40
caattgatctccagtgaatg, ceh-16_24, 24, 508, 40
ggaattcagttttgagccgg, ceh-16_25, 25, 530, 50
tctgttagatatctgctttc, ceh-16_26, 26, 552, 35
agccaattcttgtcgccgct, ceh-16_27, 27, 574, 55
attcgttgagtccgagctcg, ceh-16_28, 28, 596, 55
tggaaccagattttgatctg, ceh-16_29, 29, 618, 40
tttgagtttggcacgcttgt, ceh-16_30, 30, 640, 45
ttggaacagaagatgtcgac, ceh-16_31, 31, 662, 45
gtgacggaggagcatcgatc, ceh-16_32, 32, 684, 60
cggatgattatgaggatttg, ceh-16_33, 33, 706, 40
gttgatatcctccatgaatt, ceh-16_34, 34, 728, 35
acctttgccaactgagccat, ceh-16_35, 35, 750, 50
tggcatgtaagctcgagcct, ceh-16_36, 36, 772, 55