Van Oudenaarden Lab:C02B8.4: Difference between revisions
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>C02B8.4 (hlh-8 spliced coding region) | |||
atggtggctcgtagaaaaggagaacgcgtggttcgaaagaatgaagtggaaaatgtgcagcagagagcatgtgccaacag | |||
acgggaacgtcaaaggaccaaggaactcaatgacgctttcacacttttgcgtaaactgatcccgtcgatgccctcagaca | |||
agatgagcaagatccacacactacgcattgcaaccgattacatatccttccttgacgagatgcaaaaaaatggatgcaaa | |||
ctgtatggccattcgatcttcgacgaaaaacgtggatacaatttacagtcggctttcaatatgtggaggggtaacaatgg | |||
atacacaccaattgctggaccttcacagttgcctccactacaatctgcacatattccccctcctgctccatccagcattc | |||
ctccacactgtctgatgccccagccttggtatcagacttgtccgccgccaaaacaagaatttcatgaactgtgtcccatc | |||
tcaactccaaatcccaattcaaatccaaatcaactcactccaattcactggcaataa | |||
---- | |||
Name of probe set: hlh-8 | |||
Probes designed on Mon, 01 Mar 10 14:27:57 -0700 | |||
24 probes designed for target of length 537 (target too short for 48 probes) | |||
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC | |||
ccttttctacgagccaccat, hlh-8_1, 1, 1, 50 | |||
attctttcgaaccacgcgtt, hlh-8_2, 2, 23, 45 | |||
tctgctgcacattttccact, hlh-8_3, 3, 45, 45 | |||
tcccgtctgttggcacatgc, hlh-8_4, 4, 67, 60 | |||
gagttccttggtcctttgac, hlh-8_5, 5, 89, 50 | |||
gcaaaagtgtgaaagcgtca, hlh-8_6, 6, 111, 45 | |||
ggcatcgacgggatcagttt, hlh-8_7, 7, 133, 55 | |||
gatcttgctcatcttgtctg, hlh-8_8, 8, 155, 45 | |||
tcggttgcaatgcgtagtgt, hlh-8_9, 9, 178, 50 | |||
ctcgtcaaggaaggatatgt, hlh-8_10, 10, 200, 45 | |||
gtttgcatccatttttttgc, hlh-8_11, 11, 222, 35 | |||
tcgaagatcgaatggccata, hlh-8_12, 12, 244, 45 | |||
gactgtaaattgtatccacg, hlh-8_13, 13, 271, 40 | |||
acccctccacatattgaaag, hlh-8_14, 14, 293, 45 | |||
caattggtgtgtatccattg, hlh-8_15, 15, 315, 40 | |||
ggaggcaactgtgaaggtcc, hlh-8_16, 16, 337, 60 | |||
gggaatatgtgcagattgta, hlh-8_17, 17, 359, 40 | |||
gaatgctggatggagcagga, hlh-8_18, 18, 381, 55 | |||
tggggcatcagacagtgtgg, hlh-8_19, 19, 403, 60 | |||
cggacaagtctgataccaag, hlh-8_20, 20, 425, 50 | |||
catgaaattcttgttttggc, hlh-8_21, 21, 447, 35 | |||
tggagttgagatgggacaca, hlh-8_22, 22, 470, 50 | |||
gatttggatttgaattggga, hlh-8_23, 23, 492, 35 | |||
ttgccagtgaattggagtga, hlh-8_24, 24, 515, 45 |
Latest revision as of 14:28, 1 March 2010
Progress:
Probes designed: (03-01-2010 - Alexander van Oudenaarden)
Probes coupled:
Probes purified:
Probes tested:
Dyes available:
>C02B8.4 (hlh-8 spliced coding region)
atggtggctcgtagaaaaggagaacgcgtggttcgaaagaatgaagtggaaaatgtgcagcagagagcatgtgccaacag acgggaacgtcaaaggaccaaggaactcaatgacgctttcacacttttgcgtaaactgatcccgtcgatgccctcagaca agatgagcaagatccacacactacgcattgcaaccgattacatatccttccttgacgagatgcaaaaaaatggatgcaaa ctgtatggccattcgatcttcgacgaaaaacgtggatacaatttacagtcggctttcaatatgtggaggggtaacaatgg atacacaccaattgctggaccttcacagttgcctccactacaatctgcacatattccccctcctgctccatccagcattc ctccacactgtctgatgccccagccttggtatcagacttgtccgccgccaaaacaagaatttcatgaactgtgtcccatc tcaactccaaatcccaattcaaatccaaatcaactcactccaattcactggcaataa
Name of probe set: hlh-8
Probes designed on Mon, 01 Mar 10 14:27:57 -0700
24 probes designed for target of length 537 (target too short for 48 probes)
Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC
ccttttctacgagccaccat, hlh-8_1, 1, 1, 50
attctttcgaaccacgcgtt, hlh-8_2, 2, 23, 45
tctgctgcacattttccact, hlh-8_3, 3, 45, 45
tcccgtctgttggcacatgc, hlh-8_4, 4, 67, 60
gagttccttggtcctttgac, hlh-8_5, 5, 89, 50
gcaaaagtgtgaaagcgtca, hlh-8_6, 6, 111, 45
ggcatcgacgggatcagttt, hlh-8_7, 7, 133, 55
gatcttgctcatcttgtctg, hlh-8_8, 8, 155, 45
tcggttgcaatgcgtagtgt, hlh-8_9, 9, 178, 50
ctcgtcaaggaaggatatgt, hlh-8_10, 10, 200, 45
gtttgcatccatttttttgc, hlh-8_11, 11, 222, 35
tcgaagatcgaatggccata, hlh-8_12, 12, 244, 45
gactgtaaattgtatccacg, hlh-8_13, 13, 271, 40
acccctccacatattgaaag, hlh-8_14, 14, 293, 45
caattggtgtgtatccattg, hlh-8_15, 15, 315, 40
ggaggcaactgtgaaggtcc, hlh-8_16, 16, 337, 60
gggaatatgtgcagattgta, hlh-8_17, 17, 359, 40
gaatgctggatggagcagga, hlh-8_18, 18, 381, 55
tggggcatcagacagtgtgg, hlh-8_19, 19, 403, 60
cggacaagtctgataccaag, hlh-8_20, 20, 425, 50
catgaaattcttgttttggc, hlh-8_21, 21, 447, 35
tggagttgagatgggacaca, hlh-8_22, 22, 470, 50
gatttggatttgaattggga, hlh-8_23, 23, 492, 35
ttgccagtgaattggagtga, hlh-8_24, 24, 515, 45