User:Yun-Peng Xu: Difference between revisions

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*[[Special:Emailuser/Peng Daniel Xu|pxu999 at gmail dot com]]
*[[Special:Emailuser/Peng Daniel Xu|pxu999 at gmail dot com]]


I work in the [http://koffasresearch.wordpress.com/lab-members/ Koffas group] at [http://www.rpi.edu/ Rensselaer Polytechnic Institute]. Before we moved to RPI at February 2011, I have studied at the [http://www.buffalo.edu/ State University of New York at Buffalo] for two and a half years. My PhD projects involve developing synthetic biology tools to engineer the microbial synthesis of natural products and fuel molecules in ''E. coli''.
I am a postdoctoral research associate in [http://bamel.scripts.mit.edu/gns/ Stephanopoulos group] at [http://www.mit.edu/ Massachusetts Institute of Technology].


==Education==
==Education==

Revision as of 20:21, 24 July 2013

Contact Info

I am a postdoctoral research associate in Stephanopoulos group at Massachusetts Institute of Technology.

Education

Research interests

  1. Metabolic engineering
  2. Synthetic biology
  3. Natural Products/Biofuels
  4. Biochemical/Bioprocess engineering

Publications

Please refer to Google Scholar for complete list of publications and citations

  1. Xu P, Gu Q; Wang W, Wong L, Bower A, Collins CH and Koffas MA. (2013) Modular optimization of multi-gene pathway for fatty acids production in E. coli. Nature Communications, 4: 1409.
  2. Bhan N, Xu P and Koffas MA. (2013) Pathway and protein engineering approaches to produce novel and commodity small molecules. Current Opinion in Biotechnology, Accepted.
  3. Bhan N, Xu P, Khalidi O and Koffas MAG. (2013) Redirecting carbon flux into Malonyl-CoA to improve Resveratrol titers: Proof of concept for genetic interventions predicted by OptForce computational framework. Chemical Engineering Science, Accepted manuscript, In press
  4. Xu P and Koffas MA. (2013) Assembly of multi-gene pathways and combinatorial pathway libraries through ePathBrick vectors. Book chapter in Methods in Molecular Biology: Synthetic Biology.
  5. Xu, Peng; Bhan, Namita; Koffas, Mattheos A.G. (2013) Engineering plant metabolism into microbes: from systems biology to synthetic biology. Current Opinion in Biotechnology, 24(2), pp 291-299. PDF
  6. Xu, Peng; Vansiri, Amerin; Bhan, Namita; Koffas, Mattheos A.G. (2012) ePathBrick: A synthetic biology platform for engineering metabolic pathways in E. coli. ACS Synthetic Biology,1 (7), pp 256–266.PDF
  7. Xu, Peng; Ranganathan, Sridhar; Fowler, Zachary; Maranas, Costas D.; Koffas, Mattheos A.G. (2011) Genome-scale metabolic network modeling results in minimal interventions that cooperatively force carbon flux towards malonyl-CoA. Metabolic Engineering, Volume: 13 Issue: 5 Pages: 578-587. PDF
  8. Xu, Peng; Koffas, Mattheos A. G. (2010) Metabolic engineering of Escherichia coli for biofuel production, Biofuels, Volume: 1 Issue: 3 Pages: 493-504. PDF
  9. Zhang, Liang; Ding, Zhongyang; Xu, Peng; et al. (2011) Methyl lucidenate F isolated from the ethanol-soluble-acidic components of Ganoderma lucidum is a novel tyrosinase inhibitor,Biotechnology and Bioprocess Engineering, Volume: 16 Issue: 3 Pages: 457-461. PDF
  10. Xu, Peng; Ding, ZY; Qian, Z; et al. (2008) Improved production of mycelial biomass and ganoderic acid by submerged culture of Ganoderma lucidum SB97 using complex media, Enzyme and Microbial Technology, Volume: 42 Issue: 4 Pages: 325-331. PDF
  11. Zhang, TX; Xu, P; Sun, J; et al. (2009) Identification of Biological Wort Turbidity Caused by Microbial Contamination of Gairdner Barley, Journal of the American Society of Brewing Chemists, Volume: 67 Issue: 1 Pages: 33-37

Useful links

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