User:Wesley J. Houston/Notebook/MAP/2013/02/08

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| rowspan="9" | [[Image:KAH113012_gel1.jpg‎ |150px|Hover name]]<br>30 μL/lane, 1% agarose; [http://openwetware.org/wiki/Image:KAH_Fermentas_GeneRuler_1kbplus.jpg Ladder]
| rowspan="9" | [[Image:KAH113012_gel1.jpg‎ |150px|Hover name]]<br>30 μL/lane, 1% agarose; [http://openwetware.org/wiki/Image:KAH_Fermentas_GeneRuler_1kbplus.jpg Ladder]
|-
|-
-
| DNA (plasmid) || 15 to 25 μL
+
| DNA (plasmid) || 20 μL
|-
|-
| 10x buffer || 3.0
| 10x buffer || 3.0
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| enzyme 2 || 1.0
| enzyme 2 || 1.0
|-
|-
-
| dH<sub>2</sub>O || 0 to 10 μL
+
| dH<sub>2</sub>O || 5.0 μL
|-
|-
| &nbsp; || 30 μL --> 37°C/ ~15 min.
| &nbsp; || 30 μL --> 37°C/ ~15 min.
Line 53: Line 53:
| 1. KAH201 (S/P)/203, 6 ng + KAH182 (X/P)/1675, 25 ng || <font color="blue">TBD</font>
| 1. KAH201 (S/P)/203, 6 ng + KAH182 (X/P)/1675, 25 ng || <font color="blue">TBD</font>
|-
|-
-
| 2. KAH182 (X/P)/1685 25 ng || TBD
+
| 2. KAH182 (X/P)/1675 25 ng || TBD
|}
|}

Revision as of 16:20, 8 February 2013

Building a Reporter Gene Main project page
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February 8, 2013

  • Assembly: (5xGal4 : [Spacer : HSVtk TATA]) : (K : AmCyan : AmCyan : NLS : STOP : [polyA2]) (KAH201)/(KAH182); AmCyan reporter gene for chromatin proteins.


Assemblies

  1. KAH201/KAH182: (1) KAH201/(S/P)/203 + (2) KAH182/(X/P)/1675

> Digests (Fermentas FD)


Reagent Volume   Hover name
30 μL/lane, 1% agarose; Ladder
DNA (plasmid) 20 μL
10x buffer 3.0
enzyme 1 1.0
enzyme 2 1.0
dH2O 5.0 μL
  30 μL --> 37°C/ ~15 min.


> Measure conc.'s of gel purified fragments

Sample OD260 260/280 ng/μL
1. KAH201 (S/P) TBD TBD TBD
2. KAH182 (X/P) TBD TBD TBD


> Ligations

Ligation Plate results (lig : neg crtl) mm/dd/yy
1. KAH201 (S/P)/203, 6 ng + KAH182 (X/P)/1675, 25 ng TBD
2. KAH182 (X/P)/1675 25 ng TBD
  1 2
Insert DNA TBD ---
Vector DNA TBD TBD
2x lgn buf (Roche) 5.0 5.0
T4 ligase (NEB) 1.0 1.0
dH2O TBD TBD
  10 μL 10 μL
  • Follow quick transformation protocol
  • Add 30 uL DH5α-Turbo to each ligation; plate on 100 μg/mL Amp agar



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