# User:Vincent Rouilly/Computational Biology With R

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## Contents |

# Computational Biology with R

## Tutorials

### Running SBML models in R

- Install
**SBMLR**package- Start R, and enter:
- > source("http://bioconductor.org/biocLite.R")
- > biocLite("SBMLR")

- Load library 'SBMLR' in R by typing:
- > library("SBMLR")

- Download sample SBML file describing a A-->B reaction: media:here
- Read SBML file into R
- > myModel <- readSBML("AtoB.xml")

- Simulate model between [0,100] with 100 points
- > results=simulate(myModel,seq(0,100,1))

- Plot results
- > attach(results)
- > par(mfrow=c(2,1))
- > plot(time,s1,type="l")
- > plot(time,s2,type="l")
- > detach(results)