User:Torsten Waldminghaus/ds-oligos: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
(New page: *All oligos are two annealed strands and are in concentrations of 100pmol/μL {| border="3" ! Name !! Sequence 1 !! Sequence 2!! Characteristics !!Oligo number |- ! half-linker A |GGCCGCG...)
 
No edit summary
 
Line 28: Line 28:
|4
|4
|-
|-
!  
! In1
|
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTACATGxT
|
|P-CATGTAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|
|x=Phosphorothioate linkage; P=phosphate
|
|5
|-
! In2
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTACGATxT
|P-ATCGTAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|x=Phosphorothioate linkage; P=phosphate
|6
|-
! In3
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTAGTCAxT
|P-TGACTAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|x=Phosphorothioate linkage; P=phosphate
|7
|-
! In4
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTCCAGTxT
|P-ACTGGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|x=Phosphorothioate linkage; P=phosphate
|8
|-
! In5
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTCTGACxT
|P-GTCAGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|x=Phosphorothioate linkage; P=phosphate
|9
|-
|-
!  
! In6
|
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTCTTGAxT
|
|P-TCAAGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|
|x=Phosphorothioate linkage; P=phosphate
|
|10
|-
|-
!  
! In7
|
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTGACCTxT
|
|P-AGGTCAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|
|x=Phosphorothioate linkage; P=phosphate
|
|11
|-
|-
!  
! In8
|
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTGATGCxT
|
|P-GCATCAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|
|x=Phosphorothioate linkage; P=phosphate
|
|12
|-
|-
!  
! In9
|
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTGTCAGxT
|
|P-CTGACAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|
|x=Phosphorothioate linkage; P=phosphate
|
|13
|-
|-
!  
! In10
|
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTTAGTCxT
|
|P-GACTAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|
|x=Phosphorothioate linkage; P=phosphate
|
|14
|-
|-
!  
! In11
|
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTTGACGxT
|
|P-CGTCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|
|
|
|15
|-
|-
!  
! In12
|
|ACACTCTTTCCCTACACGACGCTCTTCCGATCTTGCTAxT
|
|P-TAGCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG
|
|x=Phosphorothioate linkage; P=phosphate
|
|16
|-
|-
}
}

Latest revision as of 07:17, 24 August 2011

  • All oligos are two annealed strands and are in concentrations of 100pmol/μL
}
Name Sequence 1 Sequence 2 Characteristics Oligo number
half-linker A GGCCGCGATATCTTATCCAACxT P-GTTGGATAAGATATCGC bold=biotin label; x=Phosphorothioate linkage; P=phosphate 1
half-linker B GGCCGCGATATACATTCCAACxT P-GTTGGAATGTATATCGC bold=biotin label; x=Phosphorothioate linkage; P=phosphate 2
half-linker no GGCCGCGATATCTTATCCAAC GTTGGATAAGATATCGC 3
ChIA-PET Illumina adapter ACACTCTTTCCCTACACGACGCTCTTCCGATCTNxN AGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage 4
In1 ACACTCTTTCCCTACACGACGCTCTTCCGATCTACATGxT P-CATGTAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 5
In2 ACACTCTTTCCCTACACGACGCTCTTCCGATCTACGATxT P-ATCGTAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 6
In3 ACACTCTTTCCCTACACGACGCTCTTCCGATCTAGTCAxT P-TGACTAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 7
In4 ACACTCTTTCCCTACACGACGCTCTTCCGATCTCCAGTxT P-ACTGGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 8
In5 ACACTCTTTCCCTACACGACGCTCTTCCGATCTCTGACxT P-GTCAGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 9
In6 ACACTCTTTCCCTACACGACGCTCTTCCGATCTCTTGAxT P-TCAAGAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 10
In7 ACACTCTTTCCCTACACGACGCTCTTCCGATCTGACCTxT P-AGGTCAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 11
In8 ACACTCTTTCCCTACACGACGCTCTTCCGATCTGATGCxT P-GCATCAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 12
In9 ACACTCTTTCCCTACACGACGCTCTTCCGATCTGTCAGxT P-CTGACAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 13
In10 ACACTCTTTCCCTACACGACGCTCTTCCGATCTTAGTCxT P-GACTAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 14
In11 ACACTCTTTCCCTACACGACGCTCTTCCGATCTTGACGxT P-CGTCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG 15
In12 ACACTCTTTCCCTACACGACGCTCTTCCGATCTTGCTAxT P-TAGCAAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG x=Phosphorothioate linkage; P=phosphate 16
Retrieved from "https://openwetware.org/mediawiki/index.php?title=User:Torsten_Waldminghaus/ds-oligos&oldid=531165"