User:Torsten Waldminghaus

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Hi, my name is Torsten Waldminghaus, and I'm currently Postdoc at the Norwegian Radium Hospital in Oslo (Norway) in [[Skarstad | Skarstad lab]]. I was let to [[OpenWetWare]] by google, searching for certain protocols. I just started my Postdoc time and I'm going to set up a bunch of methods that have not been done in my new lab. So I benefit a lot from people sharing their protocols on the internet and thought it might be a good idea to also let the world participate on my wisdom and experince. That's why I'm here. If you still want to you can [[Special:Emailuser/Torsten Waldminghaus|email me through OpenWetWare]]. Below I'll describe a bit more about myself and the stuff I'm interested in.
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Hi, my name is Torsten Waldminghaus, and I'm PI of the [[Waldminghaus | Waldminghaus Lab]]. I was let to [[OpenWetWare]] by google years back, searching for certain protocols. I benefit a lot from people sharing their protocols on the internet and thought it might be a good idea to also let the world participate on my wisdom and experince. If you still want to you can [[Special:Emailuser/Torsten Waldminghaus|email me through OpenWetWare]]. Below I'll describe a bit more about myself and the stuff I'm interested in.
== CV ==
== CV ==
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*2008: Bought T-shirt of the University of Oxford
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*since 2011: Professor for Synthetic Microbiology at [http://www.synmikro.com/en SYNMIKRO - Center for Synthetic Microbiology] of the Philipps-Universität Marburg (Germany) and PI of the [[Waldminghaus | Waldminghaus Lab]]
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* Since 2007:  Postdoc at the Department of Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo (Norway) in the lab of [[Skarstad|Kirsten Skarstad]]
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* 2007-2011:  Postdoc at the Department of Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo (Norway) in the lab of [[Skarstad|Kirsten Skarstad]]
*2004-2007:  PhD at the Ruhr-University Bochum (Germany) PhD-thesis: ‘RNA-thermometers in bacteria’ in the [http://www.ruhr-uni-bochum.de/mikrobiologie/ lab of Franz Narberhaus]
*2004-2007:  PhD at the Ruhr-University Bochum (Germany) PhD-thesis: ‘RNA-thermometers in bacteria’ in the [http://www.ruhr-uni-bochum.de/mikrobiologie/ lab of Franz Narberhaus]
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A bit more detailed I enjoy working on:  
A bit more detailed I enjoy working on:  
* Regulation of replication in bacteria
* Regulation of replication in bacteria
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* RNA dependent or other gene regulation
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* Synthetic chromosomes
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* Searching funny patterns on chromosomes or in proteins
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* Searching funny patterns on chromosomes or in proteins <cite>Line-2011</cite>
==Publications==
==Publications==
<biblio>
<biblio>
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#Stokke-2011 pmid=21163839
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#Waldminghaus-2012 pmid=22373925
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#Line-2011 pmid=21219462
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#Waldminghaus-2010-Gaubig pmid=20864473
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#Waldminghaus-2010 pmid=20602746
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#Waldminghaus-2009-RNAbiology pmid=19535917
#Waldminghaus-2009 pmid=19254745
#Waldminghaus-2009 pmid=19254745
#Waldminghaus-2008 pmid=18713019
#Waldminghaus-2008 pmid=18713019
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* http://reuter.mit.edu/dfgwiki ''wiki about german stipendiats abroad (in german)''
* http://reuter.mit.edu/dfgwiki ''wiki about german stipendiats abroad (in german)''
* http://anabench.bcm.umontreal.ca/anabench/ ''nice starting point for computational biology stuff''
* http://anabench.bcm.umontreal.ca/anabench/ ''nice starting point for computational biology stuff''
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* http://collections.plos.org/ploscompbiol/tensimplerules.php ''10 rule collection for stuff important for scientist''
===Personal Links===
===Personal Links===
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*[[/Strains|My strain list]]
*[[/Strains|My strain list]]
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*[[/Primers|My primer list]]
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*[[/qPCR-Primers|My qPCR-primer list]]
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*[[/Primer|My primer list]]
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*[[/ds-oligos|My double strand oligo list]]
*[[/primer_calculation | primer concentrations]]
*[[/primer_calculation | primer concentrations]]
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*[https://epost.rr-research.no/exchange/ mail]
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*[http://www.blogger.com/profile/04081156472724317833 blogger profile]
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*[http://www.citeulike.org/user/TorstenWaldminghaus CiteULike library]
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*[[/protein_gel_western | Protein gel and Western]]
===OWW===
===OWW===
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*[[Hardcore PubMeding (advanced PubMed searching)]]
*[[Hardcore PubMeding (advanced PubMed searching)]]
*[[OriC/ter ratio determination]]
*[[OriC/ter ratio determination]]
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*[[Cell cycle analysis]]
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*[[Berkmen | Berkmen lab]]
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*[[Mazel | Mazel lab]]
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'''Users from Germany'''
'''Users from Germany'''

Current revision

Me after being productive
Me after being productive



Hi, my name is Torsten Waldminghaus, and I'm PI of the Waldminghaus Lab. I was let to OpenWetWare by google years back, searching for certain protocols. I benefit a lot from people sharing their protocols on the internet and thought it might be a good idea to also let the world participate on my wisdom and experince. If you still want to you can email me through OpenWetWare. Below I'll describe a bit more about myself and the stuff I'm interested in.


Contents

CV

  • 2007-2011: Postdoc at the Department of Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo (Norway) in the lab of Kirsten Skarstad
  • 2004-2007: PhD at the Ruhr-University Bochum (Germany) PhD-thesis: ‘RNA-thermometers in bacteria’ in the lab of Franz Narberhaus
  • 2002-2004: Studies in bioinformatics at the University of applied science Berlin (Germany) Master-thesis: ‘In silico analysis and selection of RNA secondary structures’ at the Max Planck Institute for Infection Biology under supervision of Volker Patzel
  • 1999-2002: Studies in biology at the Ernst-Moritz-Arndt-University Greifswald (Germany) Diploma-thesis: ‘Investigations on the expression of clpX in Bacillus subtilis’ at the Division for Microbial Physiology and Molecular Biology in the lab of Michael Hecker
  • 1996-1999: Basic studies in biology at the University of Potsdam (Germany)

Grants and Awards

  • 2008-2010: Two year postdoc grant of the German Research Council (DFG)
  • 2008: Ruth Massenberg Prize of Ruhr-University Bochum (Germany) for outstanding PhD thesis
  • 2008: Travel grant of FEMS
  • 2006: Travel grant of Ruth und Gert Massenberg Stiftung

Research interests

In general I like bacteria and complex systems.

A bit more detailed I enjoy working on:

  • Regulation of replication in bacteria
  • Synthetic chromosomes
  • Searching funny patterns on chromosomes or in proteins [1]

Publications

  1. Johnsen L, Flåtten I, Morigen, Dalhus B, Bjørås M, Waldminghaus T, and Skarstad K. . pmid:21219462. PubMed HubMed [Line-2011]
  2. Stokke C, Waldminghaus T, and Skarstad K. . pmid:21163839. PubMed HubMed [Stokke-2011]
  3. Waldminghaus T, Weigel C, and Skarstad K. . pmid:22373925. PubMed HubMed [Waldminghaus-2012]
  4. Gaubig LC, Waldminghaus T, and Narberhaus F. . pmid:20864473. PubMed HubMed [Waldminghaus-2010-Gaubig]
  5. Waldminghaus T and Skarstad K. . pmid:20602746. PubMed HubMed [Waldminghaus-2010]
  6. Waldminghaus T, Gaubig LC, Klinkert B, and Narberhaus F. . pmid:19535917. PubMed HubMed [Waldminghaus-2009-RNAbiology]
  7. Waldminghaus T and Skarstad K. . pmid:19254745. PubMed HubMed [Waldminghaus-2009]
  8. Waldminghaus T, Kortmann J, Gesing S, and Narberhaus F. . pmid:18713019. PubMed HubMed [Waldminghaus-2008]
  9. Waldminghaus T, Gaubig LC, and Narberhaus F. . pmid:17647020. PubMed HubMed [Waldminghaus-2007-MGG]
  10. Waldminghaus T, Heidrich N, Brantl S, and Narberhaus F. . pmid:17630972. PubMed HubMed [Waldminghaus-2007-MolMicro]
  11. Narberhaus F, Waldminghaus T, and Chowdhury S. . pmid:16438677. PubMed HubMed [Narberhaus-2006]
  12. Waldminghaus T, Fippinger A, Alfsmann J, and Narberhaus F. . pmid:16336122. PubMed HubMed [Waldminghaus-2005]
  13. Gerth U, Kirstein J, Mostertz J, Waldminghaus T, Miethke M, Kock H, and Hecker M. . pmid:14679237. PubMed HubMed [Gerth-2004]
All Medline abstracts: PubMed HubMed

Links to follow

Personal Links

OWW

Lost and found protocols:

Personal tools