User:Torsten Waldminghaus

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[[Image:TWB.jpeg|thumb|right|500px|Me after not brushing my teeth for 4 weeks]]
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[[Image:Torsten_am_Strand.jpeg|thumb|right|400px|'''Me after being productive''']]
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== CV ==
== CV ==
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*2008: Bought T-shirt of the Univerity of Oxford
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*since 2011: Professor for Synthetic Microbiology at [http://www.synmikro.com/en SYNMIKRO - Center for Synthetic Microbiology] of the Philipps-Universität Marburg (Germany) and PI of the [[Waldminghaus | Waldminghaus Lab]]
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* Since 2007:  Postdoc at the Department of Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo (Norway) in the lab of Kirsten Skarstad
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* 2007-2011:  Postdoc at the Department of Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo (Norway) in the lab of [[Skarstad|Kirsten Skarstad]]
*2004-2007:  PhD at the Ruhr-University Bochum (Germany) PhD-thesis: ‘RNA-thermometers in bacteria’ in the [http://www.ruhr-uni-bochum.de/mikrobiologie/ lab of Franz Narberhaus]
*2004-2007:  PhD at the Ruhr-University Bochum (Germany) PhD-thesis: ‘RNA-thermometers in bacteria’ in the [http://www.ruhr-uni-bochum.de/mikrobiologie/ lab of Franz Narberhaus]
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A bit more detailed I enjoy working on:  
A bit more detailed I enjoy working on:  
* Regulation of replication in bacteria
* Regulation of replication in bacteria
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* RNA dependent or other gene regulation
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* Synthetic chromosomes
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* Searching funny patterns on chromosomes or in proteins
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* Searching funny patterns on chromosomes or in proteins <cite>Line-2011</cite>
==Publications==
==Publications==
<biblio>
<biblio>
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#Line-2011 pmid=21219462
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#Waldminghaus-2010-Gaubig pmid=20864473
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#Waldminghaus-2010 pmid=20602746
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#Waldminghaus-2009-RNAbiology pmid=19535917
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#Waldminghaus-2009 pmid=19254745
#Waldminghaus-2008 pmid=18713019
#Waldminghaus-2008 pmid=18713019
#Waldminghaus-2007-MGG pmid=17647020  
#Waldminghaus-2007-MGG pmid=17647020  
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* http://reuter.mit.edu/dfgwiki ''wiki about german stipendiats abroad (in german)''
* http://reuter.mit.edu/dfgwiki ''wiki about german stipendiats abroad (in german)''
* http://anabench.bcm.umontreal.ca/anabench/ ''nice starting point for computational biology stuff''
* http://anabench.bcm.umontreal.ca/anabench/ ''nice starting point for computational biology stuff''
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* http://collections.plos.org/ploscompbiol/tensimplerules.php ''10 rule collection for stuff important for scientist''
===Personal Links===
===Personal Links===
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*[[/Strains|My strain list]]
*[[/Strains|My strain list]]
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*[[/Primers|My primer list]]
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*[[/qPCR-Primers|My qPCR-primer list]]
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*[[/Primer|My primer list]]
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*[[/ds-oligos|My double strand oligo list]]
*[[/primer_calculation | primer concentrations]]
*[[/primer_calculation | primer concentrations]]
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*[http://www.blogger.com/profile/04081156472724317833 blogger profile]
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*[http://www.citeulike.org/user/TorstenWaldminghaus CiteULike library]
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*[[/protein_gel_western | Protein gel and Western]]
===OWW===
===OWW===
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*[[Temperature mixing formula]]
*[[Temperature mixing formula]]
*[[/Methylation analysis with qPCR |Methylation analysis with qPCR]]
*[[/Methylation analysis with qPCR |Methylation analysis with qPCR]]
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*[[Hardcore PubMeding (advanced PubMed searching)]]
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'''Users'''
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*[[OriC/ter ratio determination]]
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*[[Cell cycle analysis]]
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*[[Berkmen | Berkmen lab]]
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*[[Mazel | Mazel lab]]
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<!--
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'''Users from Germany'''
*[[User:Kersten S. Rabe|Kersten S. Rabe]]
*[[User:Kersten S. Rabe|Kersten S. Rabe]]
*[[User:Mathias Klode |Mathias Klode]]
*[[User:Mathias Klode |Mathias Klode]]
*[[User:Marcel Quint|Marcel Quint]]
*[[User:Marcel Quint|Marcel Quint]]
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*[[User:Carolin Delker|Carolin Delker]]
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*[[Tim Frenzel]]
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*[[Andreas Redel]]
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*[[User:Martin Fenner|Martin Fenner]]
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*[[Hans-Jörg Gillmann]]
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*[[User:Axel Mosig|Axel Mosig]]
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*[[User:Jan Stumpner|Jan Stumpner]]
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'''Lost and found protocols:'''
'''Lost and found protocols:'''
*[[Overlap Extension PCR]]
*[[Overlap Extension PCR]]

Current revision

Me after being productive
Me after being productive



Hi, my name is Torsten Waldminghaus, and I'm currently Postdoc at the Norwegian Radium Hospital in Oslo (Norway) in Skarstad lab. I was let to OpenWetWare by google, searching for certain protocols. I just started my Postdoc time and I'm going to set up a bunch of methods that have not been done in my new lab. So I benefit a lot from people sharing their protocols on the internet and thought it might be a good idea to also let the world participate on my wisdom and experince. That's why I'm here. If you still want to you can email me through OpenWetWare. Below I'll describe a bit more about myself and the stuff I'm interested in.


Contents

CV

  • 2007-2011: Postdoc at the Department of Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo (Norway) in the lab of Kirsten Skarstad
  • 2004-2007: PhD at the Ruhr-University Bochum (Germany) PhD-thesis: ‘RNA-thermometers in bacteria’ in the lab of Franz Narberhaus
  • 2002-2004: Studies in bioinformatics at the University of applied science Berlin (Germany) Master-thesis: ‘In silico analysis and selection of RNA secondary structures’ at the Max Planck Institute for Infection Biology under supervision of Volker Patzel
  • 1999-2002: Studies in biology at the Ernst-Moritz-Arndt-University Greifswald (Germany) Diploma-thesis: ‘Investigations on the expression of clpX in Bacillus subtilis’ at the Division for Microbial Physiology and Molecular Biology in the lab of Michael Hecker
  • 1996-1999: Basic studies in biology at the University of Potsdam (Germany)

Grants and Awards

  • 2008-2010: Two year postdoc grant of the German Research Council (DFG)
  • 2008: Ruth Massenberg Prize of Ruhr-University Bochum (Germany) for outstanding PhD thesis
  • 2008: Travel grant of FEMS
  • 2006: Travel grant of Ruth und Gert Massenberg Stiftung

Research interests

In general I like bacteria and complex systems.

A bit more detailed I enjoy working on:

  • Regulation of replication in bacteria
  • Synthetic chromosomes
  • Searching funny patterns on chromosomes or in proteins [1]

Publications

  1. Johnsen L, Flåtten I, Morigen, Dalhus B, Bjørås M, Waldminghaus T, and Skarstad K. . pmid:21219462. PubMed HubMed [Line-2011]
  2. Gaubig LC, Waldminghaus T, and Narberhaus F. . pmid:20864473. PubMed HubMed [Waldminghaus-2010-Gaubig]
  3. Waldminghaus T and Skarstad K. . pmid:20602746. PubMed HubMed [Waldminghaus-2010]
  4. Waldminghaus T, Gaubig LC, Klinkert B, and Narberhaus F. . pmid:19535917. PubMed HubMed [Waldminghaus-2009-RNAbiology]
  5. Waldminghaus T and Skarstad K. . pmid:19254745. PubMed HubMed [Waldminghaus-2009]
  6. Waldminghaus T, Kortmann J, Gesing S, and Narberhaus F. . pmid:18713019. PubMed HubMed [Waldminghaus-2008]
  7. Waldminghaus T, Gaubig LC, and Narberhaus F. . pmid:17647020. PubMed HubMed [Waldminghaus-2007-MGG]
  8. Waldminghaus T, Heidrich N, Brantl S, and Narberhaus F. . pmid:17630972. PubMed HubMed [Waldminghaus-2007-MolMicro]
  9. Narberhaus F, Waldminghaus T, and Chowdhury S. . pmid:16438677. PubMed HubMed [Narberhaus-2006]
  10. Waldminghaus T, Fippinger A, Alfsmann J, and Narberhaus F. . pmid:16336122. PubMed HubMed [Waldminghaus-2005]
  11. Gerth U, Kirstein J, Mostertz J, Waldminghaus T, Miethke M, Kock H, and Hecker M. . pmid:14679237. PubMed HubMed [Gerth-2004]
All Medline abstracts: PubMed HubMed

Links to follow

Personal Links

OWW

Lost and found protocols:

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