User:TheLarry/Notebook/Larrys Notebook/2010/09/09: Difference between revisions

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Good that should be enough
Good that should be enough


[[Image:7535dd93f8c602ee03c462e1e9b95a49.png|thumb|center|500 px|Here are the two graphs. Both the graphs' x-axis is neck lengthin aa. the y axis on the left graph is run length, and the y-axis on the right graph is velocity]]
[[Image:7535dd93f8c602ee03c462e1e9b95a49.png|thumb|center|1000 px|Here are the two graphs. Both the graphs' x-axis is neck lengthin aa. the y axis on the left graph is run length, and the y-axis on the right graph is velocity]]


Unfortunately the processivity increased with neck length, but the velocity went down that was interesting
Unfortunately the processivity increased with neck length, but the velocity went down that was interesting

Revision as of 10:22, 9 September 2010

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Neck Linker Length Changes

Now that i have the normal conditions for the neck linker length
13 aa neck linker
26 aa full neck
.38 nm per aa
persistence length of .8 nm
I want to make a graph of longer neck lengths and see if processivity goes down (hopefully) so i'll write the numbers down here so i don't get confused

14 aa neck linker

  • 14 aa neck linker = 5.32 nm
  • 28 aa full neck = 10.64 nm
  • 18 aa docked neck = 6.84 nm
  • 8 aa double docked = 3.04 nm

15 aa neck linker

  • 15 aa neck linker = 5.7 nm
  • 30 aa full neck = 11.4 nm
  • 20 aa docked neck = 7.6 nm
  • 10 aa double docked = 3.8 nm

16 aa neck linker

  • 16 aa neck linker = 6.08 nm
  • 32 aa full neck = 12.16 nm
  • 22 aa docked neck = 8.36 nm
  • 12 aa double docked = 4.56 nm

17 aa neck linker

  • 17 aa neck linker = 6.46 nm
  • 34 aa full neck = 12.92 nm
  • 24 aa docked neck = 9.12 nm
  • 14 aa double docked = 5.32 nm

Good that should be enough

Here are the two graphs. Both the graphs' x-axis is neck lengthin aa. the y axis on the left graph is run length, and the y-axis on the right graph is velocity

Unfortunately the processivity increased with neck length, but the velocity went down that was interesting


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