User:Tara K. Luckau/Notebook/Team ConGen/2013/02/27: Difference between revisions
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* Frag data: PPTX | * Frag data: PPTX | ||
* also using frag data from FHVZ (late November 2012) | |||
** (apparently, I already did this PCR of uniplexing each SW marker, then throwing it all in together ... oops) | |||
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! Marker !! SYR Genotype !! TP3 Genotype !! Uniplex comments !! Multiplex comments | ! Marker !! SYR Genotype !! TP3 Genotype !! Uniplex comments !! Multiplex comments | ||
|- | |- | ||
| style="background: yellow" | SW614-A1 (NED) || 410 415 || [poop] || tall @ 8000, very clean || short @ 300, clean | | style="background: yellow" | SW614-A1 (NED) || 410 415 || style="background: Silver" | [poop] || tall @ 8000, very clean || short @ 300, clean | ||
|- | |- | ||
| style="background: royalblue" | SW614-A4 (FAM) || 395 396 || 396 398 || tall @ 15000 || short @ 300 | | style="background: royalblue" | '''SW614-A4 (FAM)''' || '''395 396''' || '''396 398''' || '''tall @ 15000''' || '''short @ 300''' | ||
|- | |- | ||
| style="background: red" | SW614-A6 (PET) || [poop] || 255 275 || tall @ 8000 || good @ 1500 | | style="background: red" | SW614-A6 (PET) || style="background: Silver" | [poop] || 255 275 || tall @ 8000 || good @ 1500 | ||
|- | |- | ||
| style="background: green" | SW614-A7 (HEX) || 252 252 || 248 248 || tall @ 14000 || no amplification | | style="background: green" | SW614-A7 (HEX) || 252 252 || 248 248 || tall @ 14000 || style="background: Silver" | no amplification | ||
|- | |- | ||
| style="background: green" | SW614-B1 (HEX) || 316 316 || 299 316 || tall @ 16000, one replicate of SYR poop || good @ 1200 | | style="background: green" | '''SW614-B1 (HEX)''' || '''316 316''' || '''299 316''' || '''tall @ 16000, one replicate of SYR poop''' || '''good @ 1200''' | ||
|- | |- | ||
| style="background: royalblue" | SW614-B6 (FAM) || 308 310 || 308 310 || tall @ 11000 || no amplification | | style="background: royalblue" | SW614-B6 (FAM) || 308 310 || 308 310 || tall @ 11000 || style="background: Silver" | no amplification | ||
|- | |- | ||
| style="background: royalblue" | SW614-B10 (FAM) || 188 194 || 186 198 || tall @ 12000, one replicate of SYR violates slope rule || no amplification | | style="background: royalblue" | SW614-B10 (FAM) || 188 194 || 186 198 || tall @ 12000, one replicate of SYR violates slope rule || style="background: Silver" | no amplification | ||
|- | |- | ||
| style="background: yellow" | SW614-B12 (NED) || 285 285 || 255 274 || tall @ 14000 || good @ 2000 | | style="background: yellow" | '''SW614-B12 (NED)''' || '''285 285''' || '''255 274''' || '''tall @ 14000''' || '''good @ 2000''' | ||
|- | |- | ||
|} | |} |
Revision as of 12:46, 6 March 2013
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