User:Pisanu Buphamalai/Notebook/TF affininties vs nuleosome affinities/2011/09/15
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TF affinities vs nucleosome affinities | <html><img src="/images/9/94/Report.png" border="0" /></html> Main project page Next entry<html><img src="/images/5/5c/Resultset_next.png" border="0" /></html> |
Instruction
1. The original file is large so it was split and compressed. Decompressed the files and combine them in R or notepad. 2. Find correlation of TF affinities vs nucleosome affinities, for different categories (max, avg, med). That is, correlate column 3 to 6, 4 to 7, and 5 to 8. Do they give the same/different results? 3. How many types of correlation coefficients are available (e.g. Pearson, Spearman)? Do they return similar coefficient? 4. Do the three nucleosome affinity types (column 6-8) significantly different from one another? What statistic can be used to assess?
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