# User:Marshall Hampton/ScoringMatrices

(Difference between revisions)
 Revision as of 17:22, 6 July 2009 (view source) (New page: This will eventually be an article about constructing custom amino-acid scoring matrices using biopython. At the moment it is far from done.)← Previous diff Revision as of 17:25, 6 July 2009 (view source)Next diff → Line 1: Line 1: This will eventually be an article about constructing custom amino-acid scoring matrices using biopython.  At the moment it is far from done. This will eventually be an article about constructing custom amino-acid scoring matrices using biopython.  At the moment it is far from done. + + $s_{ij} = log(\frac{f_{ij}}{p_i q_j})$
$s_{ij} = log(\frac{f_{ij}}{p_i q_j})$