User:Madar Inamul Hasan: Difference between revisions
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# Computational Mass Spectrometry | # Computational Mass Spectrometry | ||
# Proteogenomics and Bioinformatics | # Proteogenomics and Bioinformatics | ||
==Research Techniques== | |||
<!-- Feel free to add brief descriptions to your research interests as well --> | |||
1 WetLab/Biotecnology Technique | |||
* Gene Cloning & Expression of Protein | |||
* Molecular Biology Techniques - PCR,RFLP | |||
* Genetic Polymorphism Study of the Human Sample or Genetics Variation Studies(SNPs) with PCR | |||
* Clinical and Molecular Diagnostic of Human Disease (HLA Tissue Typing for Kidney Transplantation) | |||
* Microbiological techniques | |||
2 Mass Spectrometry Based Technique | |||
* Cell Lysis | |||
* FASP- Filter Aided Sample Prep | |||
* BCA Assay | |||
* Stage Tip Technique | |||
* iTRAQ | |||
* In-Gel Digestion/ Off-Gell Digestion/Fractanation | |||
* 1D/2D Gel | |||
3 Computational Biology/Bioinformatics | |||
* Molecular Visualization Software : RasMol, Cn3d, spdbv. | |||
* Alignment & Editing Tools : BLAST, FASTA, BioEdit | |||
* Phylogenetic Analysis : Clustal X and Clustal W | |||
* Packages : Accelrys package. | |||
* Tools : Gene builder, Genscan,SOPMA, GORIV, PRIMER | |||
* Metabolomics Tool : Cell Designer. | |||
* Docking Tool : Hex, Arguslab & AutoDock | |||
* Structural Databases : CATH,SCOP,FSSP | |||
* Gene Prediction : Expasy tool | |||
4.Computational Mass Spectrometry | |||
* DataAnalysis - InHouse Softy | |||
* Database Search - SEQUEST,X!TANDEM,Proteome Discoverer,MS-GF+,Anderomeda | |||
* Spectrum Viewer - XCalibur,Thermo Scientific | |||
* iTRAQ - LTQ-iQuant,IDPicker,iTracker | |||
* Label Free Quantitation | |||
* Phosphopeptide | |||
* Matlab for Quantification and Statistical Analysis | |||
* Cytoscape/GeneGo for Pathway Analysis | |||
==Membership== | ==Membership== |
Revision as of 19:22, 20 December 2012
I am a new member of OpenWetWare!
Contact Info
- Madar Inamul Hasan
- Korea University
- Seoul
- South Korea
- City, State, Country etc.
- Email me through OpenWetWare
I work in the Your Lab at XYZ University. I learned about OpenWetWare from Through a friend and Browsing I came to know about this., and I've joined because I wish to explore more about the Subject and Apply practically in the research..
Education
- PhD,OncoProteomics,Department of Chemistry, Korea University,
- M.Phil.,(Biotechnology),Vinayaga Mission University,
- MS,Bioinformatics, Bharathidasan University,
- BS,Biochemistry, University of Madras,
- Post M.Sc., Advanced Diploma in Molecular Diagnostics (Sponsored by DBT, Govt. of India. New Delhi) Post M.Sc.,(ADMD)
- “Post Graduate Diploma in Computer Application”, Bharathidasan University. (PGDCA)
- “Diploma in Medical Laboratory Technology“,IMLTC,New Delhi, India. (DMLT)
- “Diploma in Fundamental English”,BPR-Institute of Health and Medical Sciences, India. (DFE)
- “Certificate in Medicinal Plant Cultivation“.Adiparasakti Agriculture College, India. (CMPC)
- “Certificate in Mushroom Cultivation“.Adiparasakti Agriculture College, Tamilnadu, India. (CMC)
Research interests
- Cancer Biomarker and protein Quantification
- Computational Mass Spectrometry
- Proteogenomics and Bioinformatics
Research Techniques
1 WetLab/Biotecnology Technique
- Gene Cloning & Expression of Protein
- Molecular Biology Techniques - PCR,RFLP
- Genetic Polymorphism Study of the Human Sample or Genetics Variation Studies(SNPs) with PCR
- Clinical and Molecular Diagnostic of Human Disease (HLA Tissue Typing for Kidney Transplantation)
- Microbiological techniques
2 Mass Spectrometry Based Technique
- Cell Lysis
- FASP- Filter Aided Sample Prep
- BCA Assay
- Stage Tip Technique
- iTRAQ
- In-Gel Digestion/ Off-Gell Digestion/Fractanation
- 1D/2D Gel
3 Computational Biology/Bioinformatics
- Molecular Visualization Software : RasMol, Cn3d, spdbv.
- Alignment & Editing Tools : BLAST, FASTA, BioEdit
- Phylogenetic Analysis : Clustal X and Clustal W
- Packages : Accelrys package.
- Tools : Gene builder, Genscan,SOPMA, GORIV, PRIMER
- Metabolomics Tool : Cell Designer.
- Docking Tool : Hex, Arguslab & AutoDock
- Structural Databases : CATH,SCOP,FSSP
- Gene Prediction : Expasy tool
4.Computational Mass Spectrometry
- DataAnalysis - InHouse Softy
- Database Search - SEQUEST,X!TANDEM,Proteome Discoverer,MS-GF+,Anderomeda
- Spectrum Viewer - XCalibur,Thermo Scientific
- iTRAQ - LTQ-iQuant,IDPicker,iTracker
- Label Free Quantitation
- Phosphopeptide
- Matlab for Quantification and Statistical Analysis
- Cytoscape/GeneGo for Pathway Analysis
Membership
- Member of The European Atherosclerosis Socitey, Sweden.Membership No: 1009. Since 2008
- Member in International Association of Computer Science and Information Technology (IACSIT). iHUB, Singapore 609431. Member No:80337544
- Member of European Compliance Academy Rapid Microbiological Method working group.
- Member in Bioinformatics-India | Hub for Bioinformatics Professionals of Indian Origin.
- Member in Bio Byte is a Nationwide Bioinformatics Resource Dataset
- Member in KOREA Science-The Gateway to S&T Information in Korea since 2010oct06
- Member in European Federation of Biotechnology. since 2010 Oct 14
Publications
- Goldbeter A and Koshland DE Jr. An amplified sensitivity arising from covalent modification in biological systems. Proc Natl Acad Sci U S A. 1981 Nov;78(11):6840-4. DOI:10.1073/pnas.78.11.6840 |
- JACOB F and MONOD J. Genetic regulatory mechanisms in the synthesis of proteins. J Mol Biol. 1961 Jun;3:318-56. DOI:10.1016/s0022-2836(61)80072-7 |
leave a comment about a paper here
- ISBN:0879697164