User:Kristian Ullrich: Difference between revisions

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==Contact Info==
==Contact Info==
*Kristian Ullrich
*Kristian Ullrich
*[http://www.ipb-halle.de Leibniz Institute of Plant Biochemistry]
*[http://http://www.labutils.de www.labutils.de]
*Independent Junior Research Group
*[[Special:Emailuser/Kristian Ullrich|Email me through OpenWetWare]] or through Kristian.Ullrich@biologie.uni-marburg.de
*Weinberg 3
*D-06120 Halle (Saale) - Germany
*[[Special:Emailuser/Kristian Ullrich|Email me through OpenWetWare]] or through kullrich@ipb-halle.de


==Education==
==Education==
*2009 I joined the [http://openwetware.org/wiki/Quint_Lab Quint Lab] to do a PhD
*2013 - Scientific coworker (Postdoc) in the group of Stefan Rensing [http://www.plantco.de plantco.de]
*2012-2012 Short visit in the group of Dirk Inzé (VIB - UGent - PSB) as a scientific coworker [http://www.psb.ugent.be/the-ipb-division/systems-biology-of-yield System biology of yield]
*2009-2012 PhD in the group of Marcel Quint [http://openwetware.org/wiki/Quint_Lab Quint Lab]
*2008 Diplom (~MSc), Christian-Albrechts-University Kiel, Institue of Molecular Phytopathology ([http://www.uni-kiel.de/phytomed/ D. Cai Lab])
*2008 Diplom (~MSc), Christian-Albrechts-University Kiel, Institue of Molecular Phytopathology ([http://www.uni-kiel.de/phytomed/ D. Cai Lab])
*2001-2008 study of Biology at the [http://www.uni-kiel.de Christian-Albrechts-University Kiel]
*2001-2008 study of Biology at the [http://www.uni-kiel.de Christian-Albrechts-University Kiel]
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==Research interests==
==Research interests==
<!-- Feel free to add brief descriptions to your research interests as well -->
<!-- Feel free to add brief descriptions to your research interests as well -->
[[Image:Cover_nature_the_green_hourglass.jpg|thumb|right|[http://www.nature.com/nature/journal/vaop/ncurrent/full/nature11394.html Nature 2012 Oct 04.]]]
plant genetics
plant genetics
*phytohormone signaling
*phytohormone signaling
*natural variation
*natural variation
*population genomics
software development
*Image processing


==Posters ==
==Publications==
{|
 
| [[Image:Ullrich_Poster1.png|thumb|left|Exzellenznetzwerk: "Strukturen und Mechanismen der biologischen Informationsverarbeitung" 2010]]
'''International peer-reviewed papers'''
[[Media:Ullrich_Poster1.pdf|download .pdf]]
 
||
[5] Optimized probe masking for comparative transcriptomics of closely related species. (Pöschl Y, Delker C, Trenner J, <u>Ullrich KK</u>, Quint M, Grosse I) [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0078497 Plos ONE 2013 Nov 08.]
  [[Image:Ullrich_Poster2.png|thumb|VIth Plant Science Student Conference 2010]]
 
|}
[4] Toward a comprehensive phylogenetic reconstruction of the evolutionary history of mitogen-activated protein kinases in the plant kingdom. (Janitza P, <u>Ullrich KK</u>, Quint M) [http://www.frontiersin.org/Plant_Proteomics/10.3389/fpls.2012.00271/abstract frontiers in PLANT SCIENCE 2012 Dec 06.]
 
[3] A transcriptomic hourglass in plant embryogenesis. (Quint M, Drost H-G, Gabel A, <u>Ullrich KK</u>, Boenn M, Grosse I) [http://www.nature.com/nature/journal/vaop/ncurrent/full/nature11394.html Nature 2012 Oct 04.]
 
[2] Molecular Evolution and Selection Patterns of Plant F-box Proteins with C-terminal Kelch Repeats. (Schumann N, Navarro-Quezada AR, <u>Ullrich K</u>, Kuhl C and Quint M) [http://www.plantphysiol.org/content/155/2/835 Plant Physiology 2011 Feb.]
 
[1] Natural Variation of Transcriptional Auxin Response Networks in Arabidopsis thaliana. (Delker C, Pöschl Y, Raschke A, <u>Ullrich K</u>, Ettingshausen S, Hauptmann V, Grosse I, Quint M) [http://www.plantcell.org/content/22/7/2184.long Plant Cell. 2010 Jul 09.]
 
'''Theses'''
 
<u>Ullrich KK</u> 2013. Population and quantitative genetic analysis of auxin response pathways in Arabidopsis thaliana. PhD Thesis, University of Halle-Wittenberg, Germany. 174pp. [http://digital.bibliothek.uni-halle.de/hs/content/titleinfo/1691867 PDF]
 
<u>Ullrich KK</u> 2009. Klonierung Organ-spezifischer Gene aus der Kartoffel und Untersuchung ihres Potentials zur Erzeugung gentechniser Pathogen-Resistenz. Diploma (~MSc) Thesis, Christian-Albrechts University of Kiel, Germany. 115pp.
 
==Conference Participation==
 
2014 PAG: Plant and Animal Genome XXII Conference, San Diego, CA, USA (Talk)
 
2013 MOSS: The 16th Annual Moss International Conference, Praha, Czech Republic (Talk)
 
2013 PAG: Plant and Animal Genome XXI Conference, San Diego, CA, USA (Paticipant)
 
2012 Meeting on Advances and Challenges of RNA-Seq Analysis, Halle (Saale), Germany (Paticipant)


==Publications==
2012 Workshop of Molecular Evolution, Cesky Krumlov, Czech Republic (Paticipant)
<!-- Replace the PubMed ID's ("pmid=#######") below with the PubMed ID's for your publications. You can add or remove lines as needed -->
 
2011 Botanikertagung, Berlin, Germany (Poster)
 
2011 Molekularbiologie der Pflanzen, Dabringhausen, Germany (Poster)
 
==Teaching Experience==
'''(Co-)Supervision''' of Masters and Bachelor theses as well as student projects
 
'''Participation in courses on teaching methods'''
 
'''Courses (co-)taught'''
 
==external links==
*[http://www.labutils.de RootDetection - Software to measure root length full automatically]


==Useful links==
==Useful links==
*[[OpenWetWare:Welcome|Introductory tutorial]]
*[[OpenWetWare:Welcome|Introductory tutorial]]
*[[Help|OpenWetWare help pages]]
*[[Help|OpenWetWare help pages]]

Revision as of 22:54, 22 February 2014

Kristian Ullrich

Contact Info

Education

Research interests

Nature 2012 Oct 04.

plant genetics

  • phytohormone signaling
  • natural variation
  • population genomics

software development

  • Image processing

Publications

International peer-reviewed papers

[5] Optimized probe masking for comparative transcriptomics of closely related species. (Pöschl Y, Delker C, Trenner J, Ullrich KK, Quint M, Grosse I) Plos ONE 2013 Nov 08.

[4] Toward a comprehensive phylogenetic reconstruction of the evolutionary history of mitogen-activated protein kinases in the plant kingdom. (Janitza P, Ullrich KK, Quint M) frontiers in PLANT SCIENCE 2012 Dec 06.

[3] A transcriptomic hourglass in plant embryogenesis. (Quint M, Drost H-G, Gabel A, Ullrich KK, Boenn M, Grosse I) Nature 2012 Oct 04.

[2] Molecular Evolution and Selection Patterns of Plant F-box Proteins with C-terminal Kelch Repeats. (Schumann N, Navarro-Quezada AR, Ullrich K, Kuhl C and Quint M) Plant Physiology 2011 Feb.

[1] Natural Variation of Transcriptional Auxin Response Networks in Arabidopsis thaliana. (Delker C, Pöschl Y, Raschke A, Ullrich K, Ettingshausen S, Hauptmann V, Grosse I, Quint M) Plant Cell. 2010 Jul 09.

Theses

Ullrich KK 2013. Population and quantitative genetic analysis of auxin response pathways in Arabidopsis thaliana. PhD Thesis, University of Halle-Wittenberg, Germany. 174pp. PDF

Ullrich KK 2009. Klonierung Organ-spezifischer Gene aus der Kartoffel und Untersuchung ihres Potentials zur Erzeugung gentechniser Pathogen-Resistenz. Diploma (~MSc) Thesis, Christian-Albrechts University of Kiel, Germany. 115pp.

Conference Participation

2014 PAG: Plant and Animal Genome XXII Conference, San Diego, CA, USA (Talk)

2013 MOSS: The 16th Annual Moss International Conference, Praha, Czech Republic (Talk)

2013 PAG: Plant and Animal Genome XXI Conference, San Diego, CA, USA (Paticipant)

2012 Meeting on Advances and Challenges of RNA-Seq Analysis, Halle (Saale), Germany (Paticipant)

2012 Workshop of Molecular Evolution, Cesky Krumlov, Czech Republic (Paticipant)

2011 Botanikertagung, Berlin, Germany (Poster)

2011 Molekularbiologie der Pflanzen, Dabringhausen, Germany (Poster)

Teaching Experience

(Co-)Supervision of Masters and Bachelor theses as well as student projects

Participation in courses on teaching methods

Courses (co-)taught

external links

Useful links

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