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|style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;"> Project name</span>
|style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]]<span style="font-size:22px;"> Project name</span>
|style="background-color: #F2F2F2" align="center"|<html><img src="/images/9/94/Report.png" border="0" /></html> [[{{#sub:{{FULLPAGENAME}}|0|-11}}|Main project page]]<br />{{#if:{{#lnpreventry:{{FULLPAGENAME}}}}|<html><img src="/images/c/c3/Resultset_previous.png" border="0" /></html>[[{{#lnpreventry:{{FULLPAGENAME}}}}{{!}}Previous entry]]<html>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</html>}}{{#if:{{#lnnextentry:{{FULLPAGENAME}}}}|[[{{#lnnextentry:{{FULLPAGENAME}}}}{{!}}Next entry]]<html><img src="/images/5/5c/Resultset_next.png" border="0" /></html>}}
|style="background-color: #F2F2F2" align="center"|[[File:Report.png|frameless|link={{#sub:{{FULLPAGENAME}}|0|-11}}]][[{{#sub:{{FULLPAGENAME}}|0|-11}}|Main project page]]<br />{{#if:{{#lnpreventry:{{FULLPAGENAME}}}}|[[File:Resultset_previous.png|frameless|link={{#lnpreventry:{{FULLPAGENAME}}}}]][[{{#lnpreventry:{{FULLPAGENAME}}}}{{!}}Previous entry]]&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;}}{{#if:{{#lnnextentry:{{FULLPAGENAME}}}}|[[{{#lnnextentry:{{FULLPAGENAME}}}}{{!}}Next entry]][[File:Resultset_next.png|frameless|link={{#lnnextentry:{{FULLPAGENAME}}}}]]}}
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[[Image:Bradford_of_Lys_vs_CaCl2.jpg]]
[[Image:Bradford_of_Lys_vs_CaCl2.jpg]]


3. Ca<sup>2+</sup> ISE
3.
 
<u>Ca<sup>2+</sup> ISE</u>
<u>Ca2+ ISE</u>
{| {{table}}
{| {{table}}
| align="center" style="background:#f0f0f0;"|'''CaCl<sub>2</sub> concentration'''
| align="center" style="background:#f0f0f0;"|'''CaCl<sub>2</sub> concentration'''
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* Use SDS, HCl, HPLC, & methanol to clean cuvette after each use
* Use SDS, HCl, HPLC, & methanol to clean cuvette after each use
* Fluorescence spectra was obtained to determine how binding of the protein was affected
* Fluorescence spectra was obtained to determine how binding of the protein was affected
[[Image:Fluorescence_Lys_vs_CaCl2.jpg]]
[[Image:UV_Lys_vs_CaCl2.jpg]]
'''NOTE'''    Both the absorption spectra and emission spectra are indicative that an equilibrium is reached with 42 μM Lysozyme and concentrations below 5 mM CaCl<sub>2</sub>. The protein concentration reaches at max absorbance at 500 μM CaCl<sub>2</sub> and then decreases at 5 mM and 50 mM, respectively, indicating that lysozyme is precipitating out of the solution.
6.  Solution Preparation
* Prepare new 0.6 g/L Lysozyme
**  '''0.0380 g''' of lysozyme dissolved in 50 mL H<sub>2</sub>O
* Prepare 5 mM Stock HCl solution
** Add '''0.5 mL''' of 0.5 M HCL to 50 mL distilled H<sub>2</sub>O
*** Dilutions were prepared from 5 mM HCl stock solution
**** 75 μM, 100 μM, 250 μM, and 500 μM
7.  Prepare New Dialysis
* 42 μM Lysozyme (0.6 g/L) vs HCl
** Use 20,000 MWCO tubing
** Add 1 mL 0.6 g/L Lysozyme to 5 cells on one side of chamber
** Add 1 mL 75 μM, 100 μM, 250 μM, 500 μM, and 5 mM HCl to the opposite side of the chamber (one concentration per cell)
** Secure wells by screwing them to prevent any evaporation
** Place on low speed shaker for one week and prepare for analysis






__NOTOC__
__NOTOC__

Latest revision as of 00:29, 27 September 2017

Project name Main project page
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October 29, 2014

Tasklist

1. Extract Lysozyme and CaCl2 solutions

  • Solutions were prepared on October 28, 2014
  • Extracted with a pasteur pipette and transferred to 30 mL extraction vials

2. Bradford Analysis

  • Extracted Lysozyme solutions that were dialyzed against CaCl2
  • 200 μL Bradford Reagent (diluted 1:3)
  • 50 μL Sample Solution
  • 750 μL 50 mM Tris/ 50 mM NaCl Buffer
  • Run UV-Vis between 400 nm and 800 nm

3. Ca2+ ISE

CaCl2 concentration mV
5μM CaCl2 11.8
Lys (1 ) 4.6
50μM CaCl2 4.2
Lys (2) 0.1
500μM CaCl2 27.4
Lys (3) 24.4
5mM CaCl2 52.1
Lys (4) 51.3
50mM CaCl2 77.3
Lys (5) 77.0

5. UV-Vis and Fluorescence

  • Sample Solutions were diluted 1:100
  • Transfer 100 μL of sample solution to a small volume cuvette
  • Measure absorbance between 200 nm and 800 nm
  • Use SDS, HCl, HPLC, & methanol to clean cuvette after each use
  • Fluorescence spectra was obtained to determine how binding of the protein was affected

NOTE Both the absorption spectra and emission spectra are indicative that an equilibrium is reached with 42 μM Lysozyme and concentrations below 5 mM CaCl2. The protein concentration reaches at max absorbance at 500 μM CaCl2 and then decreases at 5 mM and 50 mM, respectively, indicating that lysozyme is precipitating out of the solution.


6. Solution Preparation

  • Prepare new 0.6 g/L Lysozyme
    • 0.0380 g of lysozyme dissolved in 50 mL H2O
  • Prepare 5 mM Stock HCl solution
    • Add 0.5 mL of 0.5 M HCL to 50 mL distilled H2O
      • Dilutions were prepared from 5 mM HCl stock solution
        • 75 μM, 100 μM, 250 μM, and 500 μM


7. Prepare New Dialysis

  • 42 μM Lysozyme (0.6 g/L) vs HCl
    • Use 20,000 MWCO tubing
    • Add 1 mL 0.6 g/L Lysozyme to 5 cells on one side of chamber
    • Add 1 mL 75 μM, 100 μM, 250 μM, 500 μM, and 5 mM HCl to the opposite side of the chamber (one concentration per cell)
    • Secure wells by screwing them to prevent any evaporation
    • Place on low speed shaker for one week and prepare for analysis