User:Karmella Haynes/Notebook/PcTF Genomics/2012/12/26

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==12/26/12==
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* ChIP-seq enrichment: PcTF vs. PcTF mock for select genes
* ChIP-seq enrichment: PcTF vs. PcTF mock for select genes
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* Open in SeqMan pro to see raw values for four genes from 2011 paper.
* Open in SeqMan pro to see raw values for four genes from 2011 paper.
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1. CDKN2A,
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Workflow
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* Go to UCSC genome browser. Search for gene. Get coordinates.
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{| class="wikitable" border="0" cellspacing="3" <!-- Rxn. table -->
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1. CDKN2A,
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| <u>Reagent</u> || <u>Volume</u>
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| reagent 1 || # μL
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| reagent 2 || #
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| reagent 3 || #
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| reagent 4 || #
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| dH<sub>2</sub>O || #
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| &nbsp; || # μL
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--> Reaction conditions
 

Revision as of 17:41, 26 December 2012

Pc-TF Genomics Main project page
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12/26/12

  • ChIP-seq enrichment: PcTF vs. PcTF mock for select genes

ChIP: PcTF vs. PcTF mock

  • Completed PcTF (lane 1) and PcTF mock (lane 2) BAM --> assembly workflow
  • Open in SeqMan pro to see raw values for four genes from 2011 paper.

Workflow

  • Go to UCSC genome browser. Search for gene. Get coordinates.

1. CDKN2A,




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