10/24/12
- Check results ofr section 1
- Prep for week 2 (10/24/12, section 1): real DNA PCR, kits and master mixes
Check results (spot check)
Prep for Week 2, Wednesday (Sections 2, 3)
- Assign biomarker status to fictional patients on Patient Assignment Table (Google doc)
- Put into baggies: 1 marker, 1 PCR tube rack, 1 trimmed plastic bulb pipette (to be fitted into disposable sterile pipette tips, provided by Garcia)
- Master Mixes
- DONE: Promega colorless master mix: 8x 50 μL aliquots/ lab group (Joseph Mejewski) in PCR strip tubes; 48 total
- To do: DNA/ primer mixes: 1x negative, 1x positive, 3x patient 1, 3x patient 2 (8 samples total/ lab group)
DNA/primer mixes: Make ~1/3 "patients" positive for marker
| Section | Groups | Total Patients | Pos ctrls | Pos patients x3 reps | TOTAL (+)'s | Neg ctrls | Neg patients x3 reps | TOTAL (-)'s
|
| Thurs 9:30 am | 17 | 34 | 17 | 36 | 53 | 17 | 66 | 83
|
| Thurs 1:30 pm | 17 | 34 | 17 | 36 | 53 | 17 | 66 | 83
|
Per Section!
| Reagent | (+) | Mix+2 (x55) | (-) | Mix+2 (x85)
|
| Primer 1 (P0001) | 1.0 | 55.0 | 1.0 | 85.0
|
| Primer 2 (P0002) | 1.0 | 55.0 | 1.0 | 85.0
|
| Kozak plasmid (54 ng/μL) | 0.2 | 11 | --- | ---
|
| dH2O | 47.8 | 2629.0 | 48.0 | 4080
|
| | 50.0 | 2750 | 50.0 | 4250
|
|