User:Jose Fabricio Lopez/Notebook/GEDF/2012/10/11

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==Trichoderma & P. vulgaris interaction==
==Trichoderma & P. vulgaris interaction==
====Things to do====
====Things to do====
-
 
+
*Collect vials from volatiles [[User:Jose Fabricio Lopez/Notebook/GEDF/2012/10/10#Things to do| yesterday]].
====Things done====
====Things done====
-
 
+
*Collected.
===Loogbook===
===Loogbook===
 +
*VOCs collected, not measured yet.
 +
*Plants were dried 72°C 4 hrs and measured.
 +
{| {{table}}
 +
| align="center" style="background:#f0f0f0;"|
 +
| align="center" style="background:#f0f0f0;"|'''B.L'''
 +
| align="center" style="background:#f0f0f0;"|'''S.L'''
 +
| align="center" style="background:#f0f0f0;"|'''W.L'''
 +
| align="center" style="background:#f0f0f0;"|'''W.S'''
 +
|-
 +
| align="center" style="background:#f0f0f0;"|'''C1'''
 +
| 5||3||1.12gr||.61gr
 +
|-
 +
| align="center" style="background:#f0f0f0;"|'''C2'''
 +
| 5||2||.87gr||.49gr
 +
|-
 +
| align="center" style="background:#f0f0f0;"|'''C3'''
 +
| 5||2||1.2gr||.71gr
 +
|-
 +
| align="center" style="background:#f0f0f0;"|'''T1'''
 +
| 6||3||1.22gr||.75gr
 +
|-
 +
| align="center" style="background:#f0f0f0;"|'''T2'''
 +
| 6||3||.98gr||.53gr
 +
|-
 +
| align="center" style="background:#f0f0f0;"|'''T3'''
 +
| 6||3||1.28gr||1.04gr
 +
|}
 +
 +
*TotalW Control: 4.99gr
 +
*TotalW T.at:    5.74gr
 +
We need a bigger sample.
==Intergenic sequences in T.atroviride==
==Intergenic sequences in T.atroviride==
====Things to do====
====Things to do====
-
 
+
*Compare Coordinates of augustus pred with .gtf.
====Things done====
====Things done====
-
 
+
*Comparing.
===Loogbook===
===Loogbook===
 +
*As I can see and the results shows, prediction with JGI vs 454 is indifferent.
==Extras==
==Extras==
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Current revision

Gene Expression and Development in Fungi Main project page
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Contents

Trichoderma & P. vulgaris interaction

Things to do

Things done

  • Collected.

Loogbook

  • VOCs collected, not measured yet.
  • Plants were dried 72°C 4 hrs and measured.
B.L S.L W.L W.S
C1 531.12gr.61gr
C2 52.87gr.49gr
C3 521.2gr.71gr
T1 631.22gr.75gr
T2 63.98gr.53gr
T3 631.28gr1.04gr
  • TotalW Control: 4.99gr
  • TotalW T.at: 5.74gr

We need a bigger sample.

Intergenic sequences in T.atroviride

Things to do

  • Compare Coordinates of augustus pred with .gtf.

Things done

  • Comparing.

Loogbook

  • As I can see and the results shows, prediction with JGI vs 454 is indifferent.

Extras
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