User:Jose Fabricio Lopez/Notebook/GEDF/2012/09/19: Difference between revisions

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Genome file: Trichoderma_atroviride_v2.fasta
Genome file: Trichoderma_atroviride_v2.fasta
User set UTR prediction: false
Report genes on: both strands
Alternative transcripts: none
Allowed gene structure: predict any number of (possibly partial) genes
Ignore conflictes with other strand: false
====BOTH====
----------------------------------------
Wed Sep 19 21:27:43 CEST 2012 - Message:
----------------------------------------
Details of your job:
Prediction job ID: pred******
Parameter archive: parameters.tar.gz
Genome file: ****BOTH.fas


User set UTR prediction: false
User set UTR prediction: false

Revision as of 12:15, 19 September 2012

Gene Expression and Development in Fungi <html><img src="http://openwetware.org/images/9/94/Report.png" border="0" /></html> Main project page
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Trichoderma & P. vulgaris interaction

Things to do

  • Inoculate Beans new beans stock with T. atro.

Things done

Loogbook

Intergenic sequences in T.atroviride

Things to do

  • Augustus prediction with training
    • BOTH.
    • Genome.
    • 0bp away.

Things done

  • Prediction Genome

Loogbook

Genome

Prediction


Wed Sep 19 21:21:32 CEST 2012 - Message:


Details of your job:

Prediction job ID: predN*******

Parameter archive: parameters.tar.gz

Genome file: Trichoderma_atroviride_v2.fasta

User set UTR prediction: false

Report genes on: both strands

Alternative transcripts: none

Allowed gene structure: predict any number of (possibly partial) genes

Ignore conflictes with other strand: false

BOTH


Wed Sep 19 21:27:43 CEST 2012 - Message:


Details of your job:

Prediction job ID: pred******

Parameter archive: parameters.tar.gz

Genome file: ****BOTH.fas

User set UTR prediction: false

Report genes on: both strands

Alternative transcripts: none

Allowed gene structure: predict any number of (possibly partial) genes

Ignore conflictes with other strand: false

Extras