User:Jarle Pahr/Protein interaction networks

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(Databases)
(Curated datasets)
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245059/
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245059/
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2683745/
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Literature-curated protein interaction datasets: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2683745/
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Addendum: Literature-curated protein interaction datasets: http://www.nature.com/nmeth/journal/v6/n12/full/nmeth1209-934.html
Database of interacting proteins: http://dip.doe-mbi.ucla.edu/dip/Main.cgi
Database of interacting proteins: http://dip.doe-mbi.ucla.edu/dip/Main.cgi

Revision as of 07:00, 28 February 2014

Notes on Protein Interaction Networks (PIN) and relevant databases:


http://bioinfow.dep.usal.es/apid/index.htm

http://www.piercenet.com/method/overview-protein-protein-interaction-analysis

Contents

Databases

Biological General Repository for Interaction Datasets (BioGRID): http://thebiogrid.org/

http://cbg.garvan.unsw.edu.au/pina/interactome.stat.do

http://string-db.org/


Biomolecular Interaction Network Database (BIND)/Biomolecular Object Network Database (BOND):

Curated datasets

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245059/

Literature-curated protein interaction datasets: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2683745/

Addendum: Literature-curated protein interaction datasets: http://www.nature.com/nmeth/journal/v6/n12/full/nmeth1209-934.html

Database of interacting proteins: http://dip.doe-mbi.ucla.edu/dip/Main.cgi

Organizations

http://ppi-net.org/

Bibliography

http://www.ncbi.nlm.nih.gov/pubmed/20482850

http://genomebiology.com/2010/11/5/R53

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