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P.D. Karp, R. Caspi. A survey of metabolic databases emphasizing the MetaCyc family | P.D. Karp, R. Caspi. A survey of metabolic databases emphasizing the MetaCyc family | ||
http://www.amazon.com/Reprogramming-Microbial-Metabolic-Subcellular-Biochemistry/dp/9400750544/ref=sr_1_2?s=books&ie=UTF8&qid=1373902356&sr=1-2&keywords=Synthetic+Biology%3A+Tools+and+Applications |
Revision as of 08:54, 15 July 2013
Notes on metabolic engineering:
sb6.biobricks.org/poster/fitness-and-flux-in-bacterial-metabolism/
Tools
Copeland 2012. Computational tools for metabolic engineering: http://www.sciencedirect.com/science/article/pii/S1096717612000250
Keasling 2012. Synthetic biology and the development of tools for metabolic engineering: http://www.sciencedirect.com/science/article/pii/S1096717612000055
D. Chandran, F.T. Bergmann, H.M. Sauro. Computer-aided design of biological circuits using TinkerCell.
KEGG:
MetaCyc:
Model SEED:
BiGG:
Persons and researchg groups
Gregory Stephanopoulos
Jay D Keasling.
Journals
Metabolic Engineering: http://www.journals.elsevier.com/metabolic-engineering/
Bibliography
Synthetic biology devices as tools for metabolic engineering: http://www.sciencedirect.com/science/article/pii/S1369703X12000903
Parts plus pipes: Synthetic biology approaches to metabolic engineering: http://www.sciencedirect.com/science/article/pii/S1096717611001042
Martin, V. J. , Pitera, D. J. , Withers, S. T. , Newman, J. D. & Keasling, J. D. Engineering a mevalonate pathway in Escherichia coli for production of terpenoids. Nature Biotechnol. 21, 796–802 (2003
P.D. Karp, R. Caspi. A survey of metabolic databases emphasizing the MetaCyc family