User:Jarle Pahr/Cytoscape: Difference between revisions
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http://opentutorials.cgl.ucsf.edu/index.php/Tutorial:Introduction_to_Cytoscape | http://opentutorials.cgl.ucsf.edu/index.php/Tutorial:Introduction_to_Cytoscape | ||
http://opentutorials.cgl.ucsf.edu/index.php/Portal:Cytoscape3 | |||
=File formats= | =File formats= | ||
Revision as of 06:19, 31 January 2014
Le DH, Kwon YK. NetDS: a Cytoscape plugin to analyze the robustness of dynamics and feedforward/feedback loop structures of biological networks. Bioinformatics 2011b;27:2767-2768.
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0043287
Flux visualization:
http://sourceforge.net/projects/fluxvizplugin/?source=directory
Tutorials
http://opentutorials.cgl.ucsf.edu/index.php/Tutorial:Introduction_to_Cytoscape
http://opentutorials.cgl.ucsf.edu/index.php/Portal:Cytoscape3
File formats
http://wiki.cytoscape.org/Cytoscape_User_Manual/Network_Formats
