User:Ilya/Notes/Software: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
No edit summary
Line 18: Line 18:


==Bibliography==
==Bibliography==
*[http://ask.slashdot.org/article.pl?sid=05/06/17/1858205  Software for Managing Your Bibliography?]
===Linux===
*[http://www.bibtex.org/ BibTeX]
*[http://www.bibtex.org/ BibTeX]
*[http://pybliographer.org/ Pybliographer]
*[http://pybliographer.org/ Pybliographer]
*[http://icculus.org/referencer/ Referencer] is a Gnome application to organise documents or references, and ultimately generate a BibTeX bibliography file.
===OS X===
*[http://bibdesk.sourceforge.net/ BibDesk]
*[http://bibdesk.sourceforge.net/ BibDesk]
*[http://mekentosj.com/papers/ Papers]
*[http://mekentosj.com/papers/ Papers]
*[http://ask.slashdot.org/article.pl?sid=05/06/17/1858205  Software for Managing Your Bibliography?]


==Miscellaneous==
==Miscellaneous==

Revision as of 17:40, 23 January 2008

Data visualization

  • Many Eyes - a site for sharing and commenting on visualizations by IBM
  • Data360
  • Swivel: YouTube for data - visualize and share your data with others

Application servers

Whitebeam - open source; applications are written as a set of XML pages that contain embedded JavaScript

Project management

  • Planner is the GNOME project management tool
  • Eventum - web-based issue tracking system developed by MySQL

Network

  • EtherApe - a graphical network monitor
  • Wireshark: network protocol analyzer (successor to Ethereal)
  • Tor: an anonymous Internet communication system

Bibliography

Linux

OS X

Miscellaneous

  • Biotool2Web: Creating Simple Web Interfaces for Bioinformatics Applications
  • Sedna is an open source XML-native database management system developed from scratch in C/C++ and Scheme
  • Aggregate Data utilizes AJAX-based "sliders" so survey takers can choose anywhere along a spectrum of opinion
  • CHM file viewers for non-Windows platforms
  • Babel - convert between various formats (Excel, JSON, N3, RDF/XML, etc)