User:Ilya: Difference between revisions

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==Research==
__NOTOC__
[[Synthetic Biology:Semantic web ontology|Semantic Web Ontology]] for the [http://parts.mit.edu/ Registry of Standard Biological Parts].
Contact Ilya Sytchev (Илья Сычёв):
*<math>\mbox{hackdna}</math>@<math>\mbox{gmail.com}</math>
*[[Special:Emailuser/Ilya|send me an email via OpenWetWare]]


==OpenWetWare==
==Activities==
===Ideas===
* '''blacklist''' certain pages from public viewing and/or editing ([http://mail.wikipedia.org/pipermail/mediawiki-l/2004-August/000874.html Blacklist pages from viewing])
* use "endy members group" to restrict access to certain pages
===Resources===
*[http://siphs.com/ Siphs] is a peer enabled search engine and online reference for the life sciences research community.
*[http://collaboration.wikicities.com/ MetaCollab] a collaboration on collaboration.
==Software==
===Firefox===
*[http://biobar.mozdev.org/ Biobar]
*[http://lsid.mozdev.org/ LSID]
*[http://biofox.mozdev.org/ bioFOX]
===MySQL===
*[http://www.cs.wcupa.edu/~rkline/mysql-java-lin.html Java/MySQL on Linux]
*[http://www.kitebird.com/articles/mysql-xml.html Using XML with MySQL]


==Web 2.0==
===Current===
*[http://www.paulgraham.com/web20.html Web 2.0] by Paul Graham
Developing an integrated data management and analysis system for the [http://winhide.wordpress.com/2011/04/13/setting-up-a-stem-cell-commons/ Stem Cell Commons] project.
*[http://www.oreillynet.com/pub/a/oreilly/tim/news/2005/09/30/what-is-web-20.html What Is Web 2.0] by Tim O'Reilly
 
*[[Wikipedia:JSON|JSON]] is a data interchange format that can be trivially parsed by JavaScript, with JavaScript's built in eval() procedure.
===Previous===
*[[Wikipedia:YAML|YAML]] is a data serialization and lightweight markup language that takes concepts from languages such as XML, C, Python, and Perl.
*Systems Engineer at [http://www.genstruct.com/ Genstruct]
*[http://www.onlinetools.org/articles/unobtrusivejavascript/ Unobtrusive Javascript]
*[[User:Ilya/OpenWetWare|OpenWetWare]]
*[http://reddit.com/] - what's new online
*Computing at the Endy Lab:
===XMLHTTP===
**[[User:Ilya/BioBrick aligner|BioBrick aligner]]
*[[Wikipedia:XMLHTTP|XMLHTTP]] is a set of APIs that can be used by JavaScript and other web browser scripting languages to transfer XML to and from a web server using HTTP.
**[[Endy:Data storage|Data storage]]
*[http://adaptivepath.com/publications/essays/archives/000385.php Ajax: A New Approach to Web Applications]
**[[User:Ilya/Lab network|Lab network]]
*[http://www.modernmethod.com/sajax/ SAJAX]: Simple Ajax Toolkit
**[[User:Ilya/Win.mit.edu|WIN.MIT.EDU]]
*[http://dojotoolkit.com/ Dojo]
*[[User:Ilya/Yeast/Mating_pheromone_response_pathway|Mating pheromone response pathway]] analysis across [[User:Ilya/Yeast|yeast]] and [[User:Ilya/Yeast/Phylogeny|related species]]
*[http://www.intertwingly.net/blog/2005/03/16/AJAX-Considered-Harmful AJAX-Considered-Harmful]
 
*[http://twilightuniverse.com/2005/05/sack-of-ajax/ SACK]: Simple AJAX Code Kit
==Miscellaneous==
===Web Services===
<html>
*[http://webservices.xml.com/pub/a/ws/2003/09/30/soa.html Service-Oriented Architecture]
<a href="http://www2.clustrmaps.com/user/3e416041">
===Applications===
<img style="float: right" src="http://www2.clustrmaps.com/stats/maps-no_clusters/openwetware.org-wiki-User-Ilya-thumb.jpg" />
*[http://www.meebo.com/ Meebo]: Web 2.0 IM client
</a>
*[http://slashdot.org/article.pl?sid=05/09/29/000223&tid=126 Early AJAX Office Apps]
</html>
*[http://www.bindows.net/ Bindows]: desktop web applications framework
 
*[[Synthetic Biology:Semantic web ontology|Semantic Web Ontology]] for [[Synthetic Biology]] ([[User:Ilya/Registry|Registry notes]])
*[[User:Ilya/Notes|Notes]]
*[[User:Ilya/Todo|Todo]]
*[[User:Ilya/Sandbox|Sandbox]]
 
[[Category:Steering Committee member]] [[Category:Bioinformaticians]]

Revision as of 18:35, 28 October 2012

Contact Ilya Sytchev (Илья Сычёв):

Activities

Current

Developing an integrated data management and analysis system for the Stem Cell Commons project.

Previous

Miscellaneous

<html> <a href="http://www2.clustrmaps.com/user/3e416041"> <img style="float: right" src="http://www2.clustrmaps.com/stats/maps-no_clusters/openwetware.org-wiki-User-Ilya-thumb.jpg" /> </a> </html>

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