User:Tkadm30/Notebook/Cat eye syndrome: Difference between revisions

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(GRCh37.p10)
(GRCh37.p11)
Line 6: Line 6:
* also named '''Adenosine deaminase CECR1'''
* also named '''Adenosine deaminase CECR1'''
* Uniprot accession number '''Q9NZK5''' - Check this! Also you may want to verify [http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=2231495 rs2231495] for hints about the relevance of auxotrophic genes (alternative splicing) in the phylogenetical evolution of CES.  
* Uniprot accession number '''Q9NZK5''' - Check this! Also you may want to verify [http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=2231495 rs2231495] for hints about the relevance of auxotrophic genes (alternative splicing) in the phylogenetical evolution of CES.  
** See also the [http://www.ncbi.nlm.nih.gov/nuccore/224183182?report=fasta primary reference] (FASTA) for the [http://www.ncbi.nlm.nih.gov/nuccore/NT_011519.10 GRCh37.p10] assembly.  
** See also the [http://www.ncbi.nlm.nih.gov/nuccore/224183182?report=fasta primary reference] (FASTA) for the [http://www.ncbi.nlm.nih.gov/nuccore/NT_011519.10 GRCh37.p10] assembly (genome).  
** The latest <font color="red">genome reference</font> for the GRCh37.p11 assembly is available [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.23/ here].
* reaction type -> deamination
* reaction type -> deamination
* tissues: brain, liver, thymus...
* tissues: brain, liver, thymus...

Revision as of 09:48, 13 March 2013

Primer on ADA, CAP, CES, and CAMK2G (KCC2G) : An advanced AHL (light/energy) activated riboswitch and psychochemical agent using orthogonal (synthetic) recombinase promoters

  • EC 3.5.4.4 ref
  • also named Adenosine deaminase CECR1
  • Uniprot accession number Q9NZK5 - Check this! Also you may want to verify rs2231495 for hints about the relevance of auxotrophic genes (alternative splicing) in the phylogenetical evolution of CES.
  • reaction type -> deamination
  • tissues: brain, liver, thymus...
  • Litterature review: http://www.omim.org/entry/115470
  • related to chromosome 22q11
  • for PD (Score 8.991) and BPA (bis-phenol-A), see also gene CAMK2G (KCC2G) - also known as chromosome 22q10. [1] [2]

Positively matching SNPs (clinical data)

  • Oracle: You seem lost.
  • Chuck: Keep going... I've seen worst than this.
  • Oracle: Fair enough...
  • Chuck: Look, I have tons of fb cuties waiting for some action.
  • Oracle: Sure. Do you want a little blue cheese with that, sir?

Parkinson disease/CES tristable riboswitch device abstraction

  • A Parkinson/CES disease "riboswitch" is a AHL-activated (Acyl-Homoserine-Lactone) xenobiotic compound (recombinase system) modulating Ca2+/Mg2+ (CAM2KG) specific ions channel to activate RNA polymerase transcription and controlled DNA release of the V. Fischeri specific "LuxR" protein: a functional beta-amyloid ligand regulated by the EnvZ (OmpR) gene.
  • See also Featured_Parts:Light_Sensor. [ENVZ, CAMK2G, RIBOSWITCH]
  • See also Mind control: An introduction movie to optogenetics from the BBC.
  • See also the relevant Ecocyc.org entry for EnvZ here.
  • Accession number (E.coli K-12 MG1655 substr): "EG10269".
  • Full data available here.
  • See also the histidine kinase entry (EC 2.7.13.3) here.
  • Get the latest BLAST results for EG10269 here.

Glossary

  • ADA
  • AHL
  • BPA
  • CES
  • recombinase
  • CAMK2G
  • Calmodulin
  • LuxR
  • EnvZ
  • PC
  • ATP
  • LacZ
  • PD - Parkinson disease
  • cAMP
  • riboswitch
  • polymerase,
  • RNA
  • NMDA
  • trans-splicing

References

  1. http://www.genecards.org/cgi-bin/carddisp.pl?gene=CAMK2G
  2. http://www.sciencedaily.com/releases/2013/02/130225153122.htm?utm_source=dlvr.it&utm_medium=twitter