User:Eamon B. O'Dea

Contact Info

Eamon B. O'Dea

• Email me through OpenWetWare

• Georgetown University
• Department of Biology
• Washington, DC 20057
• OpenPGP key fingerprint: 93B8 FBFA 3C2C 9038 B6E9 24D7 D4C6 B841 F4AE EAD5

Postdoc Lab

• Bansal

PhD Labs

• Meyers
• Wilke

Education

• 2013, PhD, UT Austin, EEB
• 2008, BS, SUNY Geneseo, Biology

Research

Models and methods

• Parameter estimation for stochastic epidemic models
• Parameter estimation for dynamic contact networks
• Phylodynamics: methods for jointly analyzing phylogentic data of pathogens with data about population dynamics
• Degree correlations in complex networks
• Mutational robustness

Areas of application

• Infectious diseases of livestock
• Norovirus epidemiology
• HIV epidemiology
• Lethal mutagenesis

Papers

• E. B. O'Dea, K. M. Pepin, B. A. Lopman, and C. O. Wilke. Fitting outbreak models to data from many small norovirus outbreaks. Epidemics. doi:10.1016/j.epidem.2013.12.002
• E. B. O'Dea and C. O. Wilke (2011). Contact heterogeneity and phylodynamics: How contact networks shape parasite evolutionary trees. Interdiscip. Persp. Inf. Dis. 2011:238743. doi:10.1155/2011/238743
• E. B. O'Dea, T. E. Keller, and C. O. Wilke (2010). Does mutational robustness inhibit extinction by lethal mutagenesis in viral populations? PLoS Comp. Biol.

6:e1000811. doi:10.1371/journal.pcbi.1000811

Presentations

• E. B. O'Dea. Degree-correlated scale-free networks and epidemics. Undergraduate Biomathematics Day, April 2008, Niagara Falls, NY.

Posters

• E. B. O'Dea and S. Bansal. Learning patterns of transmission from the U.S. PEDV outbreak. Epidemics, November 2013, Amsterdam.
• E. B. O'Dea and C. Leary. Epidemic dynamics on randomized scale-free networks. The Joint Mathematics Meeting of the MAA and AMS, January 2008, San Diego.

Code

• Code used in my manuscript on fitting outbreak models to data from multiple outbreaks