User:Dileep D. Monie: Difference between revisions

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*Dileep D. Monie
*Dileep Monie
*[http://www.jhu.edu/ Johns Hopkins University]
*Student at [http://scholar.harvard.edu/dmonie Harvard University]
*Baltimore, MD, USA
*Director at [[BUGSS|Baltimore Under Ground Science Space]]
*[http://www.linkedin.com/in/dmonie Connect with me on LinkedIn]
*[[Special:Emailuser/Dileep D. Monie|Email me through OpenWetWare]]
*[[Special:Emailuser/Dileep D. Monie|Email me through OpenWetWare]]


I work in the [http://www.hopkinsmedicine.org/wilmer Wilmer Eye Institute] at the [http://www.hopkinsmedicine.org/som/ JHU School of Medicine].  I learned about [[OpenWetWare]] from the [http://events.ccc.de/congress/2007/Fahrplan/events/2329.en.html 24C3 Endy lecture], and I've joined because I am interested in contributing to the [[The_BioBricks_Foundation:Standards/Technical|BBF Technical Standards]].
I learned about [[OpenWetWare]] from the [http://events.ccc.de/congress/2007/Fahrplan/events/2329.en.html 24C3 Endy lecture], and I've joined because I am interested in making biology easier to engineer.


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==Research Interests==
==Research Interests==
# Synthetic Biology
# Synthetic Biology
## Standards - Establishing standards for biological parts to ensure interoperability and allow for construction of complex systems
## Standards - Establishing standards for biological parts to ensure interoperability and allow for construction of complex systems
## Biocircuits - Implementing wetware abstraction layers to allow creation of devices for cellular computation and communications
## Epigenetics - Manipulating chromatin structures with histone and DNA modifications as a form of biological software programming
## Epigenetics - Manipulating chromatin structures with histone and DNA modifications as a form of biological software programming
## Biocircuits - Designing devices and chassis for cellular computation and communications
## Delivery Systems - Making viruses or other vectors for targeted delivery of DNA parts into an established host genome
# Bioengineering
# Bioengineering
## Immunology - Defining the theoretical framework and designing components for an artificial immune system
## Immunology - Defining the theoretical framework and designing components for an artificial immune system
## Drug Discovery - Designing cell reporter systems to detect biomolecule interactions and perturbations in signal transduction
## Astrobiology - Engineering energy pathways and lifeforms sustainable in extreme environments
## Astrobiology - Engineering energy pathways and lifeforms sustainable in extreme environments
## Biocomputing - Integrating logic biocircuits on a very large scale in single cell and multicellular systems
## Biocomputing - Integrating logic biocircuits on a very large scale in single cell and multicellular systems
Line 23: Line 27:
## Policy - Balancing the needs of an open hacker community with access restrictions
## Policy - Balancing the needs of an open hacker community with access restrictions
## Testing and Certification - Establishing an "Underwriters Laboratories" for developing standards and test procedures for biosafety
## Testing and Certification - Establishing an "Underwriters Laboratories" for developing standards and test procedures for biosafety
## Countermeasures - Creating fail-safe mechanisms to mitigate potential synthetic biology abuses
## Countermeasures - Designing fail-safe mechanisms to mitigate potential synthetic biology abuses
-->
==BBF Contributions==
*[[The_BioBricks_Foundation:Standards/Technical|Technical Standards]]
*[[/Notebook/BBF_Standards_Measurement|Promoter Measurement Test]]


==Current Projects==
==OWW Brain Dump==
*[[The_BioBricks_Foundation:Standards/Technical/Measurement|Promoter Measurement Test]] (see [[The_BioBricks_Foundation:Standards/Technical/Measurement/Promoter_characterization_experiment_(FACS)|protocol]])
*[[/Notebook|Notebook]]
*[[/Recipes|Recipes]]
*[http://openwetware.org/index.php?title=Special%3ALog&type=upload&user=Dileep+D.+Monie Upload log]


My wet lab contributions are documented in my [[User:Dileep_D._Monie/Notebook|OWW Notebook]].
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==Publications==
==Publications==
Replace the PubMed ID's ("pmid=#######") below with the PubMed ID's for your publications.  You can add or remove lines as needed
<biblio>
<biblio>
#Paper1 pmid=6947258
#Paper1 pmid=10201994
#Paper2 pmid=13718526
#Paper2 pmid=10441117
// leave a comment about a paper here
#Paper3 pmid=19298678
#Book1 isbn=0879697164
#Paper4 pmid=21212284
#Book1 isbn=9780781764964
// Contributed section on "Pulmonary Hypertension" (pp. 148-9)
</biblio>
</biblio>
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Revision as of 09:43, 26 November 2014

Contact Info

I learned about OpenWetWare from the 24C3 Endy lecture, and I've joined because I am interested in making biology easier to engineer.

BBF Contributions

OWW Brain Dump

Publications

  1. Monday SR, Vath GM, Ferens WA, Deobald C, Rago JV, Gahr PJ, Monie DD, Iandolo JJ, Chapes SK, Davis WC, Ohlendorf DH, Schlievert PM, and Bohach GA. Unique superantigen activity of staphylococcal exfoliative toxins. J Immunol. 1999 Apr 15;162(8):4550-9. PubMed ID:10201994 | HubMed [Paper1]
  2. Vath GM, Earhart CA, Monie DD, Iandolo JJ, Schlievert PM, and Ohlendorf DH. The crystal structure of exfoliative toxin B: a superantigen with enzymatic activity. Biochemistry. 1999 Aug 10;38(32):10239-46. DOI:10.1021/bi990721e | PubMed ID:10441117 | HubMed [Paper2]
  3. Kelly JR, Rubin AJ, Davis JH, Ajo-Franklin CM, Cumbers J, Czar MJ, de Mora K, Glieberman AL, Monie DD, and Endy D. Measuring the activity of BioBrick promoters using an in vivo reference standard. J Biol Eng. 2009 Mar 20;3:4. DOI:10.1186/1754-1611-3-4 | PubMed ID:19298678 | HubMed [Paper3]
  4. Oh U, McCormick MJ, Datta D, Turner RV, Bobb K, Monie DD, Sliskovic DR, Tanaka Y, Zhang J, Meshulam J, and Jacobson S. Inhibition of immune activation by a novel nuclear factor-kappa B inhibitor in HTLV-I-associated neurologic disease. Blood. 2011 Mar 24;117(12):3363-9. DOI:10.1182/blood-2010-10-306571 | PubMed ID:21212284 | HubMed [Paper4]
  5. ISBN:9780781764964 [Book1]

    Contributed section on "Pulmonary Hypertension" (pp. 148-9)

All Medline abstracts: PubMed | HubMed