User:Deepak Chandran: Difference between revisions

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*Deepak Chandran
*Deepak Chandran
*University of Washington, Seattle
*Autodesk Research, San Francisco


*[[Special:deepakc@u.washington.edu/Deepak Chandran|deepakc@u.washington.edu]]
*[[Special:deepak.chandran@autodesk.com/Deepak Chandran|deepak.chandran@autodesk.com]]


[http://sites.google.com/site/dchandran1 Home Page]
[http://sites.google.com/site/dchandran1 Home Page]
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==Education==
==Education==
<!--Include info about your educational background-->
<!--Include info about your educational background-->
* present, PhD candidate in Bioengineering, Univ Washington Seattle (Herbert Sauro's group)
* Postdoctoral training at Baylor College of Medicine (Ido Golding's group)
* PhD in Bioengineering, Univ Washington Seattle (Herbert Sauro's group)
* (a few months at Keck Graduate Institute, Claremont, CA)
* (a few months at Keck Graduate Institute, Claremont, CA)
* 2006, MS in Bioinformatics, Univ. Texas El Paso
* 2006, MS in Bioinformatics, Univ. Texas El Paso
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==Research projects==
==Research projects==
* Lambda phage recombineering
* TinkerCell: a software tool that is designed to bring together computational models and wet-lab data, powered by a very easy plug-in framework allowing community to contribute
* TinkerCell: a software tool that is designed to bring together computational models and wet-lab data, powered by a very easy plug-in framework allowing community to contribute
* Synthetic Biology Open Language: a language for exchanging synthetic biology constructs.
* Synthetic Biology Open Language: a language for exchanging synthetic biology constructs.
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==Research interests==
==Research interests==
* many things...
* Education and "crowd" science
* Dynamical systems approach to biology
* Software support for synthetic biology


==Works==
==Works==
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[http://www.tinkercell.com Tinkercell]
[http://www.tinkercell.com Tinkercell]


[http://www.jbioleng.org/content/3/1/19 TinkerCell paper at J. Biol. Eng]
[http://www.jbioleng.org/content/3/1/19 TinkerCell paper in J. Biol. Eng]


[http://arxiv.org/abs/0906.0114 Bistability paper]
[http://arxiv.org/abs/0906.0114 Bistability paper]

Latest revision as of 14:36, 21 December 2012

I am a new member of OpenWetWare!

Contact Info

Deepak Chandran (an artistic interpretation)
  • Deepak Chandran
  • Autodesk Research, San Francisco

Home Page

Tinkercell

Education

  • Postdoctoral training at Baylor College of Medicine (Ido Golding's group)
  • PhD in Bioengineering, Univ Washington Seattle (Herbert Sauro's group)
  • (a few months at Keck Graduate Institute, Claremont, CA)
  • 2006, MS in Bioinformatics, Univ. Texas El Paso
  • 2004, BS in Computer Science, Univ. Texas Austin

Research projects

  • Lambda phage recombineering
  • TinkerCell: a software tool that is designed to bring together computational models and wet-lab data, powered by a very easy plug-in framework allowing community to contribute
  • Synthetic Biology Open Language: a language for exchanging synthetic biology constructs.
  • Identifying design and modeling strategies: using modular modeling to discover design patterns for achieving specific objectives

Research interests

  • Education and "crowd" science
  • Dynamical systems approach to biology
  • Software support for synthetic biology

Works

Tinkercell

TinkerCell paper in J. Biol. Eng

Bistability paper

Mathematical Modeling in Biology review

Links

Sauro Lab