User:Deepak Chandran: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
 
(26 intermediate revisions by the same user not shown)
Line 2: Line 2:


==Contact Info==
==Contact Info==
[[Image:OWWEmblem.png|thumb|right|Deepak Chandran (an artistic interpretation)]]
[[Image:Deepak.jpg|thumb|right|Deepak Chandran (an artistic interpretation)]]


*Deepak Chandran
*Deepak Chandran
*University of Washington, Seattle
*Autodesk Research, San Francisco
*Address 1
 
*Address 2
*[[Special:deepak.chandran@autodesk.com/Deepak Chandran|deepak.chandran@autodesk.com]]
*City, State, Country etc.
 
*[[Special:deepakc@u.washington.edu/Deepak Chandran|deepakc@u.washington.edu]]
[http://sites.google.com/site/dchandran1 Home Page]
[http://www.washington.edu/staff/deepakc Home Page]
 
[http://www.tinkercell.com Tinkercell]


==Education==
==Education==
<!--Include info about your educational background-->
<!--Include info about your educational background-->
* present, PhD in Bioengineering, Univ Washington Seattle (Herbert Sauro's group)
* Postdoctoral training at Baylor College of Medicine (Ido Golding's group)
* PhD in Bioengineering, Univ Washington Seattle (Herbert Sauro's group)
* (a few months at Keck Graduate Institute, Claremont, CA)
* 2006, MS in Bioinformatics, Univ. Texas El Paso
* 2006, MS in Bioinformatics, Univ. Texas El Paso
* 2004, BS in Computer Science, Univ. Texas Austin
* 2004, BS in Computer Science, Univ. Texas Austin
==Research projects==
* Lambda phage recombineering
* TinkerCell: a software tool that is designed to bring together computational models and wet-lab data, powered by a very easy plug-in framework allowing community to contribute
* Synthetic Biology Open Language: a language for exchanging synthetic biology constructs.
* Identifying design and modeling strategies: using modular modeling to discover design patterns for achieving specific objectives


==Research interests==
==Research interests==
<!-- Feel free to add brief descriptions to your research interests as well -->
* Education and "crowd" science
# Modularity in evolution
* Dynamical systems approach to biology
# Design patterns in evolution
* Software support for synthetic biology
# Synthetic Biology and engineering biology


==Works==
==Works==
<!-- Replace the PubMed ID's ("pmid=#######") below with the PubMed ID's for your publications.  You can add or remove lines as needed -->
<!-- Replace the PubMed ID's ("pmid=#######") below with the PubMed ID's for your publications.  You can add or remove lines as needed -->


[http://staff.washington.edu//deepakc/PartSyntax.pdf Syntax for Synthetic Biology modules]
[http://www.tinkercell.com Tinkercell]
 
[http://www.jbioleng.org/content/3/1/19 TinkerCell paper in J. Biol. Eng]
 
[http://arxiv.org/abs/0906.0114 Bistability paper]
 
[http://linkinghub.elsevier.com/retrieve/pii/S1740675709000358 Mathematical Modeling in Biology review]


==Links==
==Links==
[http://www.sys-bio.org Sauro Lab]
[http://www.sys-bio.org Sauro Lab]

Latest revision as of 14:36, 21 December 2012

I am a new member of OpenWetWare!

Contact Info

Deepak Chandran (an artistic interpretation)
  • Deepak Chandran
  • Autodesk Research, San Francisco

Home Page

Tinkercell

Education

  • Postdoctoral training at Baylor College of Medicine (Ido Golding's group)
  • PhD in Bioengineering, Univ Washington Seattle (Herbert Sauro's group)
  • (a few months at Keck Graduate Institute, Claremont, CA)
  • 2006, MS in Bioinformatics, Univ. Texas El Paso
  • 2004, BS in Computer Science, Univ. Texas Austin

Research projects

  • Lambda phage recombineering
  • TinkerCell: a software tool that is designed to bring together computational models and wet-lab data, powered by a very easy plug-in framework allowing community to contribute
  • Synthetic Biology Open Language: a language for exchanging synthetic biology constructs.
  • Identifying design and modeling strategies: using modular modeling to discover design patterns for achieving specific objectives

Research interests

  • Education and "crowd" science
  • Dynamical systems approach to biology
  • Software support for synthetic biology

Works

Tinkercell

TinkerCell paper in J. Biol. Eng

Bistability paper

Mathematical Modeling in Biology review

Links

Sauro Lab