User:Dan Bolser: Difference between revisions
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#Paper5 pmid=14764552 | #Paper5 pmid=14764552 | ||
#Paper6 pmid=14531933 | #Paper6 pmid=14531933 | ||
#Paper7 pmid=11791232 | #Paper7 pmid=11791232 | ||
// leave a comment about a paper here | // leave a comment about a paper here | ||
Revision as of 01:28, 7 February 2008
I am a new member of OpenWetWare!
Contact Info
- Dan Bolser
- Email me through OpenWetWare, or at dan.bolser@gmail.com
I work in bioinformatics.
Education
- 2001-2006, PhD, MRC-Dunn / MRC-LMB, UK
- 2000-2001, MS, The University of York, UK
- 1997-2000, BS, The University of York, UK
Research interests
- Developing community resources (wiki) for sharing scientific data, for example, MetaBase / MetaBase.
- The analysis of protein-protein interaction networks in a phylogenetic context (re:PSIMAP).
- The analysis of protein complexes and protein biophysics.
Publications
- Gong S, Park C, Choi H, Ko J, Jang I, Lee J, Bolser DM, Oh D, Kim DS, and Bhak J. A protein domain interaction interface database: InterPare. BMC Bioinformatics. 2005 Aug 25;6:207. DOI:10.1186/1471-2105-6-207 |
- Park D, Lee S, Bolser D, Schroeder M, Lappe M, Oh D, and Bhak J. Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map). Bioinformatics. 2005 Aug 1;21(15):3234-40. DOI:10.1093/bioinformatics/bti512 |
- Gong S, Yoon G, Jang I, Bolser D, Dafas P, Schroeder M, Choi H, Cho Y, Han K, Lee S, Choi H, Lappe M, Holm L, Kim S, Oh D, and Bhak J. PSIbase: a database of Protein Structural Interactome map (PSIMAP). Bioinformatics. 2005 May 15;21(10):2541-3. DOI:10.1093/bioinformatics/bti366 |
- Dafas P, Bolser D, Gomoluch J, Park J, and Schroeder M. Using convex hulls to extract interaction interfaces from known structures. Bioinformatics. 2004 Jul 10;20(10):1486-90. DOI:10.1093/bioinformatics/bth106 |
- Kim WK, Bolser DM, and Park JH. Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP). Bioinformatics. 2004 May 1;20(7):1138-50. DOI:10.1093/bioinformatics/bth053 |
- Bolser D, Dafas P, Harrington R, Park J, and Schroeder M. Visualisation and graph-theoretic analysis of a large-scale protein structural interactome. BMC Bioinformatics. 2003 Oct 8;4:45. DOI:10.1186/1471-2105-4-45 |
- Park J and Bolser D. Conservation of protein interaction network in evolution. Genome Inform. 2001;12:135-40.
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