User:ClarkeS: Difference between revisions
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saclarke at MIT | saclarke at MIT | ||
I am a first-year [http://web.mit.edu/be/ Biological Engineering] (BE, course 20) graduate student who worked in the [[Endy Lab]] | I am a first-year [http://web.mit.edu/be/ Biological Engineering] (BE, course 20) graduate student who worked in the [[Endy Lab]] in the summer of 2005. This semester I am taking classes, and looking for a lab to join. The Endy lab is one possibility. I naively expected to be able to continue some lab work, but classes and other demands of the first year have made that practically impossible. I am the first-year class representative to the [[MIT_Biological_Engineering_Graduate_Student_Board | BE student board]], so I am open to suggestions about improving the first-year experience. | ||
*B.S.M.E., [http://www.utexas.edu University of Texas at Austin], biomedical technical area | *B.S.M.E., [http://www.utexas.edu University of Texas at Austin], biomedical technical area | ||
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*Fulbright grant, Milan, Italy, independent study of industrial and engineering design methods, and classes in biomaterials at the [http://www.polimi.it Politecnico di Milano] | *Fulbright grant, Milan, Italy, independent study of industrial and engineering design methods, and classes in biomaterials at the [http://www.polimi.it Politecnico di Milano] | ||
My background is in mechanical engineering and design, but not of things quite as small as [[BioBricks]]. | My background is in mechanical engineering and design, but not of things quite as small as [[BioBricks]]. | ||
==Potential research topics== | ==Potential research topics== |
Revision as of 10:35, 31 October 2005
Bio
Sean Clarke
saclarke at MIT
I am a first-year Biological Engineering (BE, course 20) graduate student who worked in the Endy Lab in the summer of 2005. This semester I am taking classes, and looking for a lab to join. The Endy lab is one possibility. I naively expected to be able to continue some lab work, but classes and other demands of the first year have made that practically impossible. I am the first-year class representative to the BE student board, so I am open to suggestions about improving the first-year experience.
- B.S.M.E., University of Texas at Austin, biomedical technical area
- B.A., University of Texas at Austin, Plan II Liberal Arts Honors Program
- Fulbright grant, Milan, Italy, independent study of industrial and engineering design methods, and classes in biomaterials at the Politecnico di Milano
My background is in mechanical engineering and design, but not of things quite as small as BioBricks.
Potential research topics
- Scaling of engineered biology
- Replicating biological machines
- Technologies/vocabularies to make biological engineering easier
- Biomimicry, bioscaffolds for material processing
- Recycling/"cradle to cradle" design of biological systems
- Usability of biological design software or methods
- Biomineralization
Classes
- BE.420
- BE.430
- 7.81 Systems Biology
- 18.085 Applied Math for Engineers
Projects
- My first project was the Orthogonal cloning of clpXP from E. coli into yeast. So far I've been more successful at learning molecular biology and techniques by making mistakes than at cloning into yeast. My work is documented in a lab notebook, but I would like to move to a wiki or other on-line lab notebook for searching, organization, and linking.
- Another useful project would be the construction of a low copy number plasmid for use with BioBricks. It might be based on the F or mini-F plasmid from E. coli.