User:Barry Canton/Notebook/T7 RNAP transcription of rRNA/2008/08/21: Difference between revisions

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(Autocreate 2008/08/21 Entry for User:Barry_Canton/Notebook/T7_RNAP_transcription_of_rRNA)
 
 
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==Entry title==
Ok, I ran a gel today using the old extracts again, no reason to think they might be bad.  I followed the protocol pretty closely.  The only things that changed were -
* Insert content here...
*I did 6μl of extract so that I could split in two.  So I added 30μl of glyoxal reaction mix to each. This means that once I have added 50μl of formamide buffer that I can only add about half of the RNA to the gel.
*My glyoxalated RNA samples sat on ice for about an hour because I needed to make and autoclave the BTPE.
*I ran the gel for four hours
*I only did 20 min washes in the denaturing buffer, neutralizing buffer, and 20xSSC.
 
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Latest revision as of 18:17, 21 August 2008

<html><img src="/images/c/c3/Resultset_previous.png" border="0"/></html>Previous entry T7 RNAP transcription of rRNA

Ok, I ran a gel today using the old extracts again, no reason to think they might be bad. I followed the protocol pretty closely. The only things that changed were -

  • I did 6μl of extract so that I could split in two. So I added 30μl of glyoxal reaction mix to each. This means that once I have added 50μl of formamide buffer that I can only add about half of the RNA to the gel.
  • My glyoxalated RNA samples sat on ice for about an hour because I needed to make and autoclave the BTPE.
  • I ran the gel for four hours
  • I only did 20 min washes in the denaturing buffer, neutralizing buffer, and 20xSSC.