Talk:Wikiomics:RNA-Seq: Difference between revisions
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== SpliceTrap == | |||
http://rulai.cshl.edu/splicetrap/ | |||
SpliceTrap is a method to quantify exon inclusion levels using paired-end RNA-seq data. | |||
== wapRNA == | |||
wapRNA | |||
high-throughput RNA-Seq data (wapRNA) from next generation sequencing (NGS) platforms, such as Genome Analyzer of Illumina Inc. (Solexa) and SOLiD of Applied Biosystems (SOLiD). | |||
http://waprna.big.ac.cn/ | |||
== Olego == | |||
New to check: http://ngs-olego.sourceforge.net/ | |||
Latest revision as of 10:07, 4 June 2012
Splice analysers
Cufflinks
SpliCQ
http://drupal.bio.ifi.lmu.de/SpliCQ
IsoLasso
http://www.cs.ucr.edu/~liw/isolasso.html
SpliceTrap
http://rulai.cshl.edu/splicetrap/ SpliceTrap is a method to quantify exon inclusion levels using paired-end RNA-seq data.
wapRNA
wapRNA
high-throughput RNA-Seq data (wapRNA) from next generation sequencing (NGS) platforms, such as Genome Analyzer of Illumina Inc. (Solexa) and SOLiD of Applied Biosystems (SOLiD). http://waprna.big.ac.cn/
Olego
New to check: http://ngs-olego.sourceforge.net/
