Talk:20.109(S14):Phylogenetic and primer analyses (Day7)
From OpenWetWare
General notes and updates
Final sample-wide alignment files and trees
One representative from each sample-based group should post a .mas and .pdf file here when data are in final form. That way we'll all have quick access to the location sub-trees.
Sample # | Alignment file (.mas) | Tree file (.pdf) |
252 | Media:TR-alignment-partial.mas | Media:TR-tree-partial.pdf |
T/R microbiota
Linking a file code: [[Media: filename.extension]] or optionally [[Media: filename.extension | description]].
W/F microbiota
Linking a file code: [[Media: filename.extension]] or optionally [[Media: filename.extension | description]].
Team Color | Team Member | Gull ID | Sequence 1 (txt) | Sequence 2 (txt) | Sequence 3 (txt) | Sequence 4 (txt) | Sequence 5 (txt) | Sequence 6 (txt) | Sequence 7 (txt) | Sequence 8 (txt) | Species overview (xlsx) | Alignment (mas) | Tree (pdf) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Red | |||||||||||||
Orange | |||||||||||||
Orange | |||||||||||||
Yellow | |||||||||||||
Yellow | |||||||||||||
Green | |||||||||||||
Green | |||||||||||||
Blue | |||||||||||||
Blue | |||||||||||||
Pink | |||||||||||||
Pink | |||||||||||||
Purple | |||||||||||||
Purple | |||||||||||||
Platinum | |||||||||||||
Platinum | |||||||||||||
White | |||||||||||||
White |
T/R microsporidia gels
W/F microsporidia gels