Talk:20.109(S14):Phylogenetic and primer analyses (Day7): Difference between revisions
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|[[Media: TR-304-Alignment- | |[[Media: TR-304-Alignment-FINAL.mas]] | ||
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|[[Media: TRGreen304CB.xlsx]] | |[[Media: TRGreen304CB.xlsx]] | ||
|[[Media: TR-304-Alignment- | |[[Media: TR-304-Alignment-FINAL.mas]] | ||
|[[Media: TR-304-Tree-Final.pdf]] | |[[Media: TR-304-Tree-Final.pdf]] | ||
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|[[Media: TRGreen304C15.txt]] | |[[Media: TRGreen304C15.txt]] | ||
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|[[Media: TRGreen304CR- | |[[Media: TRGreen304CR-FINAL.xlsx]] | ||
|[[Media: TR-304-Alignment-Final.mas]] | |[[Media: TR-304-Alignment-Final.mas]] | ||
|[[Media: TR-304-Tree-Final.pdf]] | |[[Media: TR-304-Tree-Final.pdf]] | ||
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|[[Media: TRBlueKT.xlsx]] | |[[Media: TRBlueKT.xlsx]] | ||
|[[Media: TR-304-Alignment- | |[[Media: TR-304-Alignment-FINAL.mas]] | ||
|[[Media: TR-304-Tree-Final.pdf]] | |[[Media: TR-304-Tree-Final.pdf]] | ||
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|[[Media:WFRed286_2.xlsx]] | |[[Media:WFRed286_2.xlsx]] | ||
|[[Media:WF-286-alignment.mas]] | |[[Media:WF-286-alignment-partial.mas]] | ||
|[[Media:WF-286-Tree-final.pdf]] | |[[Media:WF-286-Tree-final.pdf]] | ||
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|[[Media:WFWhite260C7.txt]] | |[[Media:WFWhite260C7.txt]] | ||
|[[Media: WFWhite260C8.txt]] | |[[Media: WFWhite260C8.txt]] | ||
|[[Media | |[[Media: WFWhite260.xlsx]] | ||
|[[Media: WF260alignment-partial.mas]] | |[[Media: WF260alignment-partial.mas]] | ||
|[[Media: WF260Tree-partial.pdf]] | |[[Media: WF260Tree-partial.pdf]] |
Latest revision as of 11:22, 9 March 2014
General notes and updates
Sample # | Species | Sex | Location | Final MEGA File |
308 | RBG | F | Carson Beach | Media: TR-308-alignment-FINAL.mas |
312 | RBG | F | Carson Beach | Media: TR-312-alignment_FINAL.mas |
290 | RBG | F | Carson Beach | Media: WF-290-alignment-FINAL.mas |
274 | RBG | M | Carson Beach | Media: WF-274-alignment_FINAL.mas |
286 | RBG | M | Carson Beach | Media: WF-286-alignment-FINAL.mas |
294 | RBG | M | Carson Beach | Media: WF-294-Alignment-FINAL.mas |
304 | HG | M | South Bay Center | Media: TR-304-Alignment-FINAL.mas |
252 | HG | M | South Bay Center | Media: TR-252-Alignment_finalv1.mas |
260 | HG | M | South Bay Center | Media: WF260alignment-final2.mas |
T/R microbiota
Linking a file code: [[Media: filename.extension]] or optionally [[Media: filename.extension | description]].
W/F microbiota
Linking a file code: [[Media: filename.extension]] or optionally [[Media: filename.extension | description]].
T/R microsporidia gels
Gel number | Reference samples | Group 1 | Group 2 | Picture |
---|---|---|---|---|
T/R 1 | Specificity (VC, EH, mixture) | Orange | Yellow | Media:TR1.BMP |
T/R 2 | Specificity (VC, EH, mixture) | Blue | W/F Green | Media:TR2.BMP |
T/R 3 | Sensitivity (EH: lo, mid, hi) | Red | Green | Media:TR3.BMP |
T/R 4 | Sensitivity (EH: lo, mid, hi) | Pink | Blue | Media:TR4.BMP |
W/F microsporidia gels
Gel number | Reference samples | Group 1 | Group 2 | Picture |
---|---|---|---|---|
W/F 1 | Specificity (VC, EH, mixture) | Blue | Purple | Media:WF1.BMP |
W/F 2 | Specificity (VC, EH, mixture) | Silver | White | Media:WF2.BMP |
W/F 3 | Sensitivity (EH: lo, mid, hi) | Red | Orange | Media:WF3.BMP |
W/F 4 | Sensitivity (EH: lo, mid, hi) | Yellow | Pink | Media:WF4.BMP |