Synbio 2007 - Revision history

Jadietrich: /* Announcements */

Jadietrich — Thu, 14 Jun 2007 21:12:31 GMT

Announcements

←Older revision		Revision as of 21:12, 14 June 2007
Line 22:		Line 22:
	*ASSIGNMENT (Due 2/16): email Jeff with your three top choices for topics to lead in literature review group discussion. If there is a topic outside of those provided you may list it as well.		*ASSIGNMENT (Due 2/16): email Jeff with your three top choices for topics to lead in literature review group discussion. If there is a topic outside of those provided you may list it as well.
	*ASSIGNMENT (Due 3/9): email Jeff with your group project members and a 1-2 sentence description of your project.		*ASSIGNMENT (Due 3/9): email Jeff with your group project members and a 1-2 sentence description of your project.
-	*GROUP PROJECTS: A partial list of projects handed in have been posted.	+	*GROUP PROJECTS: A partial list of projects handed in have been posted. [[Synbio 2007/Presentations and References\|(Presentations and References)]]

	==Tentative Schedule==		==Tentative Schedule==

Jadietrich: /* Announcements */

Jadietrich — Thu, 14 Jun 2007 21:12:03 GMT

Announcements

←Older revision		Revision as of 21:12, 14 June 2007
Line 22:		Line 22:
	*ASSIGNMENT (Due 2/16): email Jeff with your three top choices for topics to lead in literature review group discussion. If there is a topic outside of those provided you may list it as well.		*ASSIGNMENT (Due 2/16): email Jeff with your three top choices for topics to lead in literature review group discussion. If there is a topic outside of those provided you may list it as well.
	*ASSIGNMENT (Due 3/9): email Jeff with your group project members and a 1-2 sentence description of your project.		*ASSIGNMENT (Due 3/9): email Jeff with your group project members and a 1-2 sentence description of your project.
-	*~~There are a number~~ of ~~areas~~ in the Bears Breaking Boundaries competition that are related to synthetic biology, including designing an iGEM project and writing a white paper. The link to the site is: [[http://contest.berkeley.edu/main_pages/1\| Bears Breaking Boundaries 2007]]	+	*GROUP PROJECTS: A partial list of projects handed in have been posted.
-	*The Feb 23rd lecture will be held at 717 Potter Street in Berkeley to accomodate our panelist's schedules. There are a number of different ways to get to Potter Street, included below:	+
-	~~#Drive-there is a large parking lot, but you will need to get a temporary parking pass when you arrive to the building.~~	+
-	~~#LBL Potter Street Shuttle. This picks up next to the Wells Fargo on Center Street at 9:20. You will need an LBL badge to get on the shuttle though~~	+
-	~~#The #9 Bus. This picks up at the downtown berkely BART and you can get off at 7th and Anthony (Right next to Sharfenberger) and the Potter Street Building is a block to the west.~~	+
-		+
-	~~In any case, give Jeff a call (281-772-4475) if there are problems...plus I will probably be driving people down to Potter Street anyways~~.	+

	==Tentative Schedule==		==Tentative Schedule==

Jadietrich: /* Group Project Ideas */

Jadietrich — Thu, 14 Jun 2007 21:11:06 GMT

Group Project Ideas

←Older revision		Revision as of 21:11, 14 June 2007
Line 103:		Line 103:

	==Group Project Ideas==		==Group Project Ideas==
-	<i>Group ~~project examples~~ from 2007</i> [[Synbio 2007/Presentations and References\|(Presentations and References)]]	+	<i>Group projects from 2007</i> [[Synbio 2007/Presentations and References\|(Presentations and References)]]

	#Dual-use strategies: Identify a synthetic biology “platform” or product with “dual-use” applications for both developed and developing country markets		#Dual-use strategies: Identify a synthetic biology “platform” or product with “dual-use” applications for both developed and developing country markets

Jadietrich: /* Literature Review Assignment */

Jadietrich — Thu, 14 Jun 2007 21:10:38 GMT

Literature Review Assignment

←Older revision		Revision as of 21:10, 14 June 2007
Line 66:		Line 66:
	*Lecture 2/2 - no discussion		*Lecture 2/2 - no discussion
	*Lecture 2/9: Introduction to Synthetic Biology #1		*Lecture 2/9: Introduction to Synthetic Biology #1
-	**Presenters: Sisi Chen, Jim Cheng, Arash Calafi ~~[[Synbio 2007/Presentations and References\|(Presentations and References)]]~~	+	**Presenters: Sisi Chen, Jim Cheng, Arash Calafi
	**A Synthetic Oscillatory Network of Transcriptional Regulators [[http://www.elowitz.caltech.edu/publications/Repressilator.pdf]]		**A Synthetic Oscillatory Network of Transcriptional Regulators [[http://www.elowitz.caltech.edu/publications/Repressilator.pdf]]
	**Foundations of Engineering Biology [[http://www.nature.com/nature/journal/v438/n7067/pdf/nature04342.pdf]]		**Foundations of Engineering Biology [[http://www.nature.com/nature/journal/v438/n7067/pdf/nature04342.pdf]]

Jadietrich: /* Tentative Schedule */

Jadietrich — Thu, 14 Jun 2007 21:10:23 GMT

Tentative Schedule

←Older revision		Revision as of 21:10, 14 June 2007
Line 35:		Line 35:
	*1/26 Modeling and Design of Synthetic Systems - Adam Arkin		*1/26 Modeling and Design of Synthetic Systems - Adam Arkin
	**Genetic models, stochastic and continuous simulations, adaption of circuit methods to SB.		**Genetic models, stochastic and continuous simulations, adaption of circuit methods to SB.
-	*2/2 Drugs from Bugs-Jay Keasling ~~[[Synbio 2007/Presentations and References\|(Presentations and References)]]~~	+	*2/2 Drugs from Bugs-Jay Keasling
-	*2/9 Design of Tumor-Killing Bacteria - J. Christopher Anderson ~~[[Synbio 2007/Presentations and References\|(Presentations and References)]]~~	+	*2/9 Design of Tumor-Killing Bacteria - J. Christopher Anderson
	*2/16 James Carothers		*2/16 James Carothers
	*2/23 Panel Discussion (George Church, Drew Endy, Jay Keasling) -- @ Potter Street (see above directions in the announcements section)		*2/23 Panel Discussion (George Church, Drew Endy, Jay Keasling) -- @ Potter Street (see above directions in the announcements section)

Jadietrich: /* Group Project Ideas */

Jadietrich — Thu, 14 Jun 2007 20:43:22 GMT

Group Project Ideas

←Older revision		Revision as of 20:43, 14 June 2007
Line 103:		Line 103:

	==Group Project Ideas==		==Group Project Ideas==
-	<i>Group project examples from 2007<i> [[Synbio 2007/Presentations and References\|(Presentations and References)]]	+	<i>Group project examples from 2007</i> [[Synbio 2007/Presentations and References\|(Presentations and References)]]

	#Dual-use strategies: Identify a synthetic biology “platform” or product with “dual-use” applications for both developed and developing country markets		#Dual-use strategies: Identify a synthetic biology “platform” or product with “dual-use” applications for both developed and developing country markets

Jadietrich: /* Group Project Ideas */

Jadietrich — Thu, 14 Jun 2007 20:42:10 GMT

Group Project Ideas

←Older revision		Revision as of 20:42, 14 June 2007
Line 103:		Line 103:

	==Group Project Ideas==		==Group Project Ideas==
		+	<i>Group project examples from 2007<i> [[Synbio 2007/Presentations and References\|(Presentations and References)]]

	#Dual-use strategies: Identify a synthetic biology “platform” or product with “dual-use” applications for both developed and developing country markets		#Dual-use strategies: Identify a synthetic biology “platform” or product with “dual-use” applications for both developed and developing country markets

Jadietrich: /* Tentative Schedule */

Jadietrich — Thu, 19 Apr 2007 17:15:05 GMT

Tentative Schedule

←Older revision		Revision as of 17:15, 19 April 2007
Line 47:		Line 47:
	*4/06 Paul Rabinow (1/2)		*4/06 Paul Rabinow (1/2)
	*4/13 Paul Rabinow (2/2)		*4/13 Paul Rabinow (2/2)
-	*4/20 ~~Samir Kaul (Khosla Ventures)~~	+	*4/20
	*4/27 Group Presentations		*4/27 Group Presentations
	**Group 1: Andrew Chang, Jeff Chen, Ziv Shafir		**Group 1: Andrew Chang, Jeff Chen, Ziv Shafir

Jadietrich: /* Literature Review Assignment */

Jadietrich — Thu, 19 Apr 2007 17:14:37 GMT

Literature Review Assignment

←Older revision		Revision as of 17:14, 19 April 2007
Line 98:		Line 98:
	**Synthetic Biology 2.0 Declaration [[http://openwetware.org/wiki/Synthetic_Biology:SB2Declaration]]		**Synthetic Biology 2.0 Declaration [[http://openwetware.org/wiki/Synthetic_Biology:SB2Declaration]]
	**Synthetic Biology: Navigating the Challenges Ahead [[http://openwetware.org/images/0/02/Aj_bhutkar_synth_bio_jbb_2005.pdf]]		**Synthetic Biology: Navigating the Challenges Ahead [[http://openwetware.org/images/0/02/Aj_bhutkar_synth_bio_jbb_2005.pdf]]
-	*Lecture 4/20: Business and Synthetic Biology ~~(articles to be posted shortly)~~	+	*Lecture 4/20: Business and Synthetic Biology
	**Presenters: Jeff Chen, Gondica Nguyen, Ziv Shafir		**Presenters: Jeff Chen, Gondica Nguyen, Ziv Shafir
	**[[Media:Synthetic Biology; Caught Between Property Rights, the Public Domain, and the Commons.pdf]]. This journal article is not yet published, but is forthcoming in PLoS Biology (JAD, 2/25/07)		**[[Media:Synthetic Biology; Caught Between Property Rights, the Public Domain, and the Commons.pdf]]. This journal article is not yet published, but is forthcoming in PLoS Biology (JAD, 2/25/07)

Anthonystavrianakis: /* Literature Review Assignment */

Anthonystavrianakis — Tue, 10 Apr 2007 04:04:35 GMT

Literature Review Assignment

←Older revision		Revision as of 04:04, 10 April 2007
Line 95:		Line 95:
	**BioBricks Website [[http://parts.mit.edu/registry/index.php/Main_Page]]. Students, please familiarize yourselves with what content can be found on the website. Discussion leaders, please provide a tutorial on how one could use the website.		**BioBricks Website [[http://parts.mit.edu/registry/index.php/Main_Page]]. Students, please familiarize yourselves with what content can be found on the website. Discussion leaders, please provide a tutorial on how one could use the website.
	*Lecture 4/13: Ethics in Synthetic Biology		*Lecture 4/13: Ethics in Synthetic Biology
-	**Presenters: Greg Davis, Jill Fletcher, Marisa Harano~~, Anthony Stavrianakis~~	+	**Presenters: Greg Davis, Jill Fletcher, Marisa Harano
	**Synthetic Biology 2.0 Declaration [[http://openwetware.org/wiki/Synthetic_Biology:SB2Declaration]]		**Synthetic Biology 2.0 Declaration [[http://openwetware.org/wiki/Synthetic_Biology:SB2Declaration]]
	**Synthetic Biology: Navigating the Challenges Ahead [[http://openwetware.org/images/0/02/Aj_bhutkar_synth_bio_jbb_2005.pdf]]		**Synthetic Biology: Navigating the Challenges Ahead [[http://openwetware.org/images/0/02/Aj_bhutkar_synth_bio_jbb_2005.pdf]]