Sriram Kosuri: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
No edit summary
No edit summary
Line 30: Line 30:


===Publications===
===Publications===
'''Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription'''<br>
Feng Zhang, Le Cong, Simona Lodato, [[Sriram Kosuri]], [[George_Church|George M. Church]] & Paola Arlotta
''Nature Biotechnology (2011) [http://dx.doi.org/10.1038/nbt.1775 doi:10.1038/nbt.1775]
'''Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips'''<br>
'''Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips'''<br>
[[Sriram Kosuri]], [[User:Nikolai_Eroshenko|Nikolai Eroshenko]], Emily LeProust, Michael Super, Jeffrey Way, Jin Billy Li,[[George_Church|George Church]]<br>
[[Sriram Kosuri]], [[User:Nikolai_Eroshenko|Nikolai Eroshenko]], Emily LeProust, Michael Super, Jeffrey Way, Jin Billy Li & [[George_Church|George Church]]<br>
''Nature Biotechnology'' (2010)  [http://dx.doi.org/10.1038/nbt.1716 doi:10.1038/nbt.1716]
''Nature Biotechnology'' (2010)  [http://dx.doi.org/10.1038/nbt.1716 doi:10.1038/nbt.1716]



Revision as of 08:50, 20 January 2011

Personal

Sri at work

Bio

I am curently a postdoc in George Church's lab in the Department of Genetics at Harvard Medical School and the Wyss Institute. From September 2007 to February 2009, I worked at a small Cambridge-area startup called Joule Biotechnologies. I am also on the Board of Directors for OpenWetWare. I previously did a short postdoctoral stint in Mike Laub's lab working on cell cycle in Caulobacter crescentus. Prior to the Laub lab, I was a graduate student in Drew Endy's lab and worked on understanding the development of a simple virus (T7) that infects E. coli. As an undergraduate at UC Berkeley, I worked with Adam Arkin, Dale Kaiser, and Roy Welch on modeling traveling wave formation in M. xanthus.

Science

Interests

  • Developing technologies on making biology easier to engineer.
  • Enabling the design, construction, and use of biological organisms for the purposes of further scientific understanding; keeping extremely aware of the use of engineered biological organisms for other purposes.
  • Understanding those aspects of biological design that allow for certain robust features of development in the face of large intrinsic and extrinsic variation specifically on non-evolutionary time-scales (I am currently giving up on the past. That may change in the future.).
  • Property rights as related to biological information and organisms; understanding and reforming current and future frameworks; I really like these people
  • OpenWetWare of course!

Past Projects

Rebuilding T7

TABASCO -- A single molecule base-pair resolved gene expression simulator

Measure and Models of T7 Infection

How does T7 deal with Uncertainty

T7.2 Tests

Publications

Efficient construction of sequence-specific TAL effectors for modulating mammalian transcription
Feng Zhang, Le Cong, Simona Lodato, Sriram Kosuri, George M. Church & Paola Arlotta Nature Biotechnology (2011) doi:10.1038/nbt.1775

Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips
Sriram Kosuri, Nikolai Eroshenko, Emily LeProust, Michael Super, Jeffrey Way, Jin Billy Li & George Church
Nature Biotechnology (2010) doi:10.1038/nbt.1716

Refactoring bacteriophage T7
Leon Y. Chan, Sriram Kosuri and Drew Endy
Molecular Systems Biology 13 September 2005 DOI:10.1038/msb4100025
URL PDF reprint News & Views October 2004 version

TABASCO: A single molecule, base-pair resolved gene expression simulator
Sriram Kosuri, Jason Kelly and Drew Endy
BMC Bioinformatics 2007, 8:480 doi:10.1186/1471-2105-8-480
URL

Interesting Stuff

The beginnings of a blog.

See my interesting stuff page

Post-doctoral Fellowships

A failed Research Plan for a job at Harvard's CGR

My Thesis!

My contributions to OWW

Sriram Kosuri/temp

Contact

Phone: still waiting
OWW users: Post a message on my talk page, or send me an email.
Email:
Postal:
Harvard Medical School
Genetics Department
New Research Building (NRB) Rooms 232
77 Ave. Louis Pasteur
Boston, MA 02115 USA

Calendar


Who's Visiting

<html> <a href="http://clustrmaps.com/counter/maps.php?url=http://openwetware.org/wiki/Sriram_Kosuri" id="clustrMapsLink"><img src="http://clustrmaps.com/counter/index2.php?url=http://openwetware.org/wiki/Sriram_Kosuri" border=1 alt="Locations of visitors to this page"onError="this.onError=null; this.src='http://www.meetomatic.com/images/clustrmaps-back-soon.jpg'; document.getElementById('clustrMapsLink').href='http://clustrmaps.com/'"> </a> </html>