Smolke:Reprints: Difference between revisions
From OpenWetWare
Jump to navigationJump to search
(16 intermediate revisions by 5 users not shown) | |||
Line 7: | Line 7: | ||
==Refereed Publications== | ==Refereed Publications== | ||
# Liang JC, Chang AL, Kennedy AB, Smolke CD. 2012. A high-throughput, quantitative cell-based screen for efficient tailoring of RNA device activity. Nuc. Acids Res. | # Chang AL, McKeague M, Liang JC, Smolke CD. 2014. Kinetic and equilibrium binding characterization of aptamers to small molecules using a label-free, sensitive, and scalable platform. Analytical Chemistry. 86: 3273-3278. [http://pubs.acs.org/doi/abs/10.1021/ac5001527 link] | ||
# Galloway KE, Franco E, Smolke CD. 2013. Dynamically reshaping signaling networks to program cell fate via genetic controllers. Science. DOI: 10.1126/science.1235005. [http://www.sciencemag.org/content/341/6152/1235005 link] | |||
# Galanie S, Siddiqui MS, Smolke CD. 2013. Molecular tools for chemical biotechnology. Curr. Opin. Biotechnol. DOI: 10.1016/j.copbio.2013.03.001. [http://www.sciencedirect.com/science/article/pii/S0958166913000554 link] | |||
# Wang YH, Wei KY, Smolke CD. 2013. Synthetic Biology: Advancing the design of diverse genetic systems. Annu. Rev. Chem. Biomol. Eng. DOI: 10.1146/annurev-chembioeng-061312-103351. [http://www.annualreviews.org/doi/abs/10.1146/annurev-chembioeng-061312-103351 link] | |||
# Wei KY, Chen YY, Smolke CD. 2013. A yeast-based rapid prototype platform for gene-control elements in mammalian cells. Biotechnol. Bioeng. DOI: 10.1002/bit.24792. [http://onlinelibrary.wiley.com/doi/10.1002/bit.24792/full link] | |||
# Kennedy AB, Liang JC, Smolke CD. 2012. A versatile cis-blocking and trans-activation strategy for ribozyme characterization. Nuc. Acids Res. DOI: 10.1093/nar/gks1036 [http://nar.oxfordjournals.org/content/early/2012/11/15/nar.gks1036.long link] | |||
# Michener JK, Nielsen J, Smolke CD. 2012. Identification and treatment of heme depletion attributed to overexpression of a lineage of evolved P450 monooxygenases. Proc. Natl. Acad. Sci. USA. DOI: 10.1073/pnas.1212287109 [http://www.pnas.org/content/109/47/19504.long link] | |||
# Liang JC, Chang AL, Kennedy AB, Smolke CD. 2012. A high-throughput, quantitative cell-based screen for efficient tailoring of RNA device activity. Nuc. Acids Res. 40: e154. [http://nar.oxfordjournals.org/content/40/20/e154.full link] | |||
# Michener JK, Smolke CD. 2012. High-throughput enzyme evolution in Saccharomyces cerevisiae using a synthetic RNA switch. Metab. Eng. 14: 306-16. [http://www.sciencedirect.com/science/article/pii/S109671761200047X link] | # Michener JK, Smolke CD. 2012. High-throughput enzyme evolution in Saccharomyces cerevisiae using a synthetic RNA switch. Metab. Eng. 14: 306-16. [http://www.sciencedirect.com/science/article/pii/S109671761200047X link] | ||
# Chen YY, Galloway KE, Smolke CD. 2012. Synthetic biology: advancing biological frontiers by building synthetic systems. Genome Biol. 13: 240. [http://genomebiology.com/2012/13/2/240/ link] | # Chen YY, Galloway KE, Smolke CD. 2012. Synthetic biology: advancing biological frontiers by building synthetic systems. Genome Biol. 13: 240. [http://genomebiology.com/2012/13/2/240/ link] | ||
# Chang AL, Wolf JJ, Smolke CD. 2012. Synthetic RNA switches as a tool for temporal and spatial control over gene expression. Curr. Opin. Biotechnol. | # Chang AL, Wolf JJ, Smolke CD. 2012. Synthetic RNA switches as a tool for temporal and spatial control over gene expression. Curr. Opin. Biotechnol. 23: 679-88. [http://www.sciencedirect.com/science/article/pii/S0958166912000171 link] | ||
# Siddiqui MS, Thodey K, Trenchard I, Smolke CD. 2012. Advancing secondary metabolite biosynthesis in yeast with synthetic biology tools. FEMS Yeast Research. 12: 144-70. [http://onlinelibrary.wiley.com/doi/10.1111/j.1567-1364.2011.00774.x/full link] | # Siddiqui MS, Thodey K, Trenchard I, Smolke CD. 2012. Advancing secondary metabolite biosynthesis in yeast with synthetic biology tools. FEMS Yeast Research. 12: 144-70. [http://onlinelibrary.wiley.com/doi/10.1111/j.1567-1364.2011.00774.x/full link] | ||
# Chen YY, Smolke CD. 2011. From DNA to targeted therapeutics: bringing synthetic biology to the clinic. Sci. Transl. Med. 3: 106ps42. [http://stm.sciencemag.org/content/3/106/106ps42.full link] | # Chen YY, Smolke CD. 2011. From DNA to targeted therapeutics: bringing synthetic biology to the clinic. Sci. Transl. Med. 3: 106ps42. [http://stm.sciencemag.org/content/3/106/106ps42.full link] | ||
# Michener JK, Thodey K, Liang JC, Smolke CD. 2012. Applications of genetically-encoded biosensors for the construction and control of biosynthetic pathways. Metab. Eng. 14: 212-22. [http://www.sciencedirect.com/science/article/pii/S1096717611000942 link] | # Michener JK, Thodey K, Liang JC, Smolke CD. 2012. Applications of genetically-encoded biosensors for the construction and control of biosynthetic pathways. Metab. Eng. 14: 212-22. [http://www.sciencedirect.com/science/article/pii/S1096717611000942 link] | ||
# Liang JC, Bloom RJ, Smolke CD. 2011. Engineering biological systems with | # Liang JC, Bloom RJ, Smolke CD. 2011. Engineering biological systems with synthetic RNA molecules. Mol. Cell. 43: 915-26. [http://www.sciencedirect.com/science/article/pii/S1097276511006447 link] | ||
# Babiskin AH, Smolke CD. 2011. Synthetic RNA modules for fine-tuning gene expression levels in yeast by modulating RNase III activity. Nuc. Acids Res. 39: 8651-64. [http://nar.oxfordjournals.org/content/39/19/8651.long link] | # Babiskin AH, Smolke CD. 2011. Synthetic RNA modules for fine-tuning gene expression levels in yeast by modulating RNase III activity. Nuc. Acids Res. 39: 8651-64. [http://nar.oxfordjournals.org/content/39/19/8651.long link] | ||
# Smolke CD, Silver PA. 2011. Informing biological design by integration of systems and synthetic biology. Cell. 144: 855-9. [http://www.sciencedirect.com/science/article/pii/S0092867411001723 link] | # Smolke CD, Silver PA. 2011. Informing biological design by integration of systems and synthetic biology. Cell. 144: 855-9. [http://www.sciencedirect.com/science/article/pii/S0092867411001723 link] | ||
Line 44: | Line 51: | ||
==Non-Refereed Publications== | ==Non-Refereed Publications== | ||
# Smolke CD, Tyo KE. 2012. Synthetic biology: Emerging methodologies to catalyze the metabolic engineering design cycle. Met. Eng. | # Smolke CD, Tyo KE. 2012. Synthetic biology: Emerging methodologies to catalyze the metabolic engineering design cycle. Met. Eng. [http://www.sciencedirect.com/science/article/pii/S1096717612000341 link] | ||
# Thodey K, Smolke CD. 2011. Cell Biology. Bringing it together with RNA. Science. 333: 412-3. | # Thodey K, Smolke CD. 2011. Cell Biology. Bringing it together with RNA. Science. 333: 412-3. [http://www.sciencemag.org/content/333/6041/412.full link] | ||
# Smolke CD. 2009. Building outside of the box: iGEM and the BioBricks Foundation. Nat. Biotech. 27:1099-102. | # Smolke CD. 2009. Building outside of the box: iGEM and the BioBricks Foundation. Nat. Biotech. 27:1099-102. [http://www.nature.com/nbt/journal/v27/n12/full/nbt1209-1099.html link] | ||
# Smolke CD. 2009. Cell Biology. It’s the DNA that counts. Science. 324: 1156-7. | # Smolke CD. 2009. Cell Biology. It’s the DNA that counts. Science. 324: 1156-7. [http://www.sciencemag.org/content/324/5931/1156.full link] | ||
# Win MN, Smolke CD. 2007. RNA as a versatile and powerful platform for engineering genetic regulatory tools. Biotechnology and Genetic Engineering Reviews. 24: 311-46. | # Win MN, Smolke CD. 2007. RNA as a versatile and powerful platform for engineering genetic regulatory tools. Biotechnology and Genetic Engineering Reviews. 24: 311-46. | ||
# Baker D, Church G, Collins J, Endy D, Jacobson J, Keasling J, Modrich P, Smolke C, Weiss R. 2006. Engineering life: building a Fab for biology. Scientific American. 294: 44-51. | # Baker D, Church G, Collins J, Endy D, Jacobson J, Keasling J, Modrich P, Smolke C, Weiss R. 2006. Engineering life: building a Fab for biology. Scientific American. 294: 44-51. | ||
# Martin VJJ, Smolke CD, Keasling JD. 2002. Redesigning cells for the production of complex organic molecules. ASM News. 68: 336-43. | # Martin VJJ, Smolke CD, Keasling JD. 2002. Redesigning cells for the production of complex organic molecules. ASM News. 68: 336-43. [http://newsarchive.asm.org/jul02/feature3.asp link] | ||
==Books and Book Chapters== | ==Books and Book Chapters== | ||
# Liang JC, Smolke CD. 2012. Rational design and tuning of ribozyme-based devices. In: Hartig J, editor. Methods in Molecular Biology. 848:439-54. | # Liang JC, Smolke CD. 2012. Rational design and tuning of ribozyme-based devices. In: Hartig J, editor. Methods in Molecular Biology. 848:439-54. [http://www.springerprotocols.com/Full/doi/10.1007/978-1-61779-545-9_27?encCode=T0lCOjcyXzktNTQ1LTk3NzE2LTEtODc5&tokenString=NgevSbxhzQ/5JDUFp0DUPg== link] | ||
# Win MN, Liang JC, Smolke CD. 2010. Frameworks for programming RNA devices. In: Mayer G, editor. The Chemical Biology of Nucleic Acids. U.K.: John Wiley & Sons, Ltd. pp. 323-38. | # Win MN, Liang JC, Smolke CD. 2010. Frameworks for programming RNA devices. In: Mayer G, editor. The Chemical Biology of Nucleic Acids. U.K.: John Wiley & Sons, Ltd. pp. 323-38. [http://onlinelibrary.wiley.com/doi/10.1002/9780470664001.ch15/summary link] | ||
# Win MN, Smolke CD. 2009. Regulating gene expression through engineered RNA technologies. In: Smolke CD, editor. Handbook for Metabolic Pathway Engineering: Tools and Applications. San Diego: CRC Press. | # Win MN, Smolke CD. 2009. Regulating gene expression through engineered RNA technologies. In: Smolke CD, editor. Handbook for Metabolic Pathway Engineering: Tools and Applications. San Diego: CRC Press. | ||
# Smolke CD, Martin VJJ, Keasling JD. 2004. Tools for metabolic engineering in Escherichia coli. In: Baneyx F, editor. Protein Expression Technologies: Current Status and Future Trends. U.K.: Horizon Scientific Press. | # Smolke CD, Martin VJJ, Keasling JD. 2004. Tools for metabolic engineering in Escherichia coli. In: Baneyx F, editor. Protein Expression Technologies: Current Status and Future Trends. U.K.: Horizon Scientific Press. | ||
==Edited Works in Print== | ==Edited Works in Print== | ||
# Smolke CD, editor. 2009. Handbook for Metabolic Pathway Engineering: Fundamentals (volume I). San Diego: CRC Press. | # Smolke CD, editor. 2009. Handbook for Metabolic Pathway Engineering: Fundamentals (volume I). San Diego: CRC Press. [http://books.google.com/books/about/The_Metabolic_Pathway_Engineering_Handbo.html?id=wzAPgK1ulBQC Google Books] [http://www.amazon.com/The-Metabolic-Pathway-Engineering-Handbook/dp/1439802963 Amazon] | ||
# Smolke CD, editor. 2009. Handbook for Metabolic Pathway Engineering: Tools and Applications (volume II). San Diego: CRC Press. | # Smolke CD, editor. 2009. Handbook for Metabolic Pathway Engineering: Tools and Applications (volume II). San Diego: CRC Press. [http://books.google.com/books/about/The_Metabolic_Pathway_Engineering_Handbo.html?id=zCqHswQYAfgC Google Books] [http://www.amazon.com/The-Metabolic-Pathway-Engineering-Handbook/dp/1420077651 Amazon] |
Revision as of 14:45, 21 May 2014
|