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__TOC__
Welcome to DeoxyriboNucleicAwesome's BIOMOD Wiki!
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[[Image:Example.jpg]]


[[Image:.jpg|thumb|right]]
Jon Sack, Ph.D.
<pre>
[[Image:whatever.png]]
</pre>
==Research interests==
COMPOSITE MATERIALS [PMC] IN BONE GRAFTING SUBSTITUTES.


In this research, natural fibers like Sisal (Agave sisalana), Banana (Musa sepientum) & Roselle (Hibiscus sabdariffa), Sisal and banana (hybrid), Roselle and banana (hybrid) and Roselle and sisal (hybrid) are fabricated with bio epoxy resin using molding method. In this work, impact strength of Sisal and banana (hybrid), Roselle and banana (hybrid and Roselle and sisal (hybrid) composite at dry and wet conditions were studied. Impact test were conducted izod impact testing machine. In this work micro structure of the specimens are scanned by the Scanning Electron Microscope.
----


I also invested heavily in Myspace, and lost most of my life savings.
== My Test of OpenWetWare Editing ==
I would like to try the following editing tasks:


I
want
to keep
lines
separate


{{scroll box|width=75%|text=


<dpl>
open micoooooooo
category=SL-Coding
* Add a [hyperlink](https://uk.yahoo.com/?ilc=400).
mode = unordered
** For example: Link to the paper can be found HERE[http://www.nature.com/nature/journal/v403/n6767/pdf/403339a0.pdf].
order = descending
* Add a document or Dropbox link:
</dpl>
** Addition of document: [[Image:Example.jpg]]
}}
** Addition of Dropbox link: The file can be downloaded from Dropbox via this [LINK]
* Cite a paper.
** Hopefully see the list of references at the bottom of the page.
** This is a really interesting study <ref>Reference goes here</ref>
* Add a picture.


==Education==
[[Image:popcorn.jpg]]
<!--Include info about your educational background-->
* Ph.D., Stanford University, Department of Biological Sciences
* B.A., Reed College, Biochemistry


==Institutional Affiliation==
== References ==
{{Reflist}}


Assistant Professor
----


Department of Physiology & Membrane Biology
'''EmbryoName HK023- chicken embryo- Stage 19.5 - 8.12.14'''


School of Medicine


University of California
==Experiment==


4126 Tupper Hall
'''Objective'''
To transform HB101s with a plasmid encoding GFP (called pGFP) and express this protein by inducing with arabinose. Testing out openwetware
'''Procedure'''


One Shields Avenue
* Trigeminal nerve bilaterally DiO crystals
* 7th/8th nerve bilaterally DiI crystals (Big chunk on 7th nerve on L side and big chunk on 8th on R side)


Davis, California 95616
'''Notes'''
No obvious contamination, purposelly put a greater chunk of dye on the 7th nerve on the L side and the 8th nerve on the R side so will see if there is any visible difference between the amount of neurons labelled in different positions within the rhombomere.


530.752.4131 tel
==Files==
530.752.5314 lab tel
530.752.5423 fax


jsack@ucdavis.edu
*
*
*
*


==Math Practice==
*
** abd dfg
**


''x''<sup>2</sup>+''y''<sup>2</sup>=''z''<sup>2</sup>
==Results==


{{math|''x''<sup>2</sup>+''y''<sup>2</sup>{{=}}''z''<sup>2</sup>}}
===Facial===
(Green)


<math>x^2+y^2=z^2</math>
* '''''Afferents'''''
 


&sum;i=∞
* '''''Efferents'''''


<math>e^{\pi i} + 1 = 0</math>


<math>\frac{\sqrt{2\alpha_1+e^2}}{\log \alpha_2}</math>


==Google Docs==
 
{{#widget:Google Document
 
|id=19hEjXbw_pwVjY5vwu-hQGfqpLTuwWQemRzEsCvJw640
 
}}
===VIII ===
(green)
 
* '''''Afferents'''''
 
 
 
* '''''Efferents'''''
 
 
* '''''Other'''''
 
 
 
===Basal plate ===
(red)
 
 
==Summary==
 
'''Questions'''
 
'''Future'''
 
 
<META HTTP-EQUIV="refresh" CONTENT="10;URL=http://my.newplace.com/">
 
 
Mary {pad|4em} had a little lamb.
 
'''Badrul Arefin'''
 
 
# Jeong M^, {{spaces|7}} <u>Sun D^</u>, Luo M^, Huang Y, Challen GA, <u>Rodriguez B</u>, Zhang X, Chavez L, Wang H, Hannah R, Kim S, Yang L, Ko M, Chen R, Gottgens B, Lee JS, Gunaratne P, Godley LA, Darlington GJ, Rao A, <u>Li W*</u>, Goodell MA*: Large conserved domains of low DNA methylation maintained by Dnmt3a. <br/> '''''          Nature Genetics''''' . Accepted.
# <u>Akdemir KC</u>, Jain AK, Alton K, Arronow B, J. CA, ..., <u>Li W*</u>, Barton MC*: Genome Wide Profiling Reveals Stimulus-specific Functions of p53 During Differentiation and DNA Damage of Human Embryonic Stem Cells. <br/>'''''Nucleic Acids Res.''''' Accepted
# Klein JB, Piao L, …, <u>Li W</u>, Shi X, Kutateladze TG: KDM5B demethylase binds to its histone target and the product through distinct modules.<br/>''Cell Reports''. Accepted. <br/><br/>'''2013''' <br/><br/>
# <u>Chen K</u>, <u>Xi Y</u>, Pan X, Dent S, He X, <u>Li W*</u>: DANPOS: Dynamic Analysis of Nucleosome Position and Occupancy by Sequencing. <br/>'''''Genome Res.''''' 23 (2013) 341-351. [http://www.bcm.edu/news/item.cfm?newsID=6723 BCM News];  [http://epigenie.com/danpos-reveals-dynamic-nucleosomes Epigenie Headline]  <br/><br/>
# <u>Wang L</u>, <u>Park JH</u>, Wang S, Kocher JP, <u>Li W*</u>: CPAT: Coding-Potential Assessment Tool Using an Alignment-Free Logistic Regression Model. <br/>'''''Nucleic Acids Res.''''' 41 (2013) e74.<br/><br/>
# <u>Lin X</u>, <u>Sun D</u>, <u>Rodriguez B</u>, Zhao Q, Sun H, Zhang Y, <u>Li W*</u>: BseQC: Quality Control of bisulfite sequencing experiments. <br/>'''''Bioinformatics''''' 29 (2013) 3227-3229. PMCID: PMC3842756 .<br/><br/>
# <u>Chen K^</u>, Wilson MA^, Hirsch C, Watson A, Liang S, Lu Y, <u>Li W*</u>, Dent S*: Stabilization of the Promoter Nucleosomes in Nucleosome Free Region by the Yeast Ssn6-Tup1 Corepressor. <br/>'''''Genome Res.''''' 23 (2013) 312-322. <br/><br/>

Revision as of 07:51, 17 September 2016


My Test of OpenWetWare Editing

I would like to try the following editing tasks:

I want to keep lines separate


open micoooooooo

  • Add a [hyperlink](https://uk.yahoo.com/?ilc=400).
    • For example: Link to the paper can be found HERE[1].
  • Add a document or Dropbox link:
    • Addition of document:
    • Addition of Dropbox link: The file can be downloaded from Dropbox via this [LINK]
  • Cite a paper.
    • Hopefully see the list of references at the bottom of the page.
    • This is a really interesting study [1]
  • Add a picture.

References

  1. ↑ Reference goes here

EmbryoName HK023- chicken embryo- Stage 19.5 - 8.12.14


Experiment

Objective To transform HB101s with a plasmid encoding GFP (called pGFP) and express this protein by inducing with arabinose. Testing out openwetware Procedure

  • Trigeminal nerve bilaterally DiO crystals
  • 7th/8th nerve bilaterally DiI crystals (Big chunk on 7th nerve on L side and big chunk on 8th on R side)

Notes No obvious contamination, purposelly put a greater chunk of dye on the 7th nerve on the L side and the 8th nerve on the R side so will see if there is any visible difference between the amount of neurons labelled in different positions within the rhombomere.

Files

    • abd dfg

Results

Facial

(Green)

  • Afferents


  • Efferents




VIII

(green)

  • Afferents


  • Efferents


  • Other


Basal plate

(red)


Summary

Questions

Future


<META HTTP-EQUIV="refresh" CONTENT="10;URL=http://my.newplace.com/">


Mary {pad|4em} had a little lamb.

Badrul Arefin


  1. Jeong M^, Template:Spaces Sun D^, Luo M^, Huang Y, Challen GA, Rodriguez B, Zhang X, Chavez L, Wang H, Hannah R, Kim S, Yang L, Ko M, Chen R, Gottgens B, Lee JS, Gunaratne P, Godley LA, Darlington GJ, Rao A, Li W*, Goodell MA*: Large conserved domains of low DNA methylation maintained by Dnmt3a.
    Nature Genetics . Accepted.
  2. Akdemir KC, Jain AK, Alton K, Arronow B, J. CA, ..., Li W*, Barton MC*: Genome Wide Profiling Reveals Stimulus-specific Functions of p53 During Differentiation and DNA Damage of Human Embryonic Stem Cells.
    Nucleic Acids Res. Accepted
  3. Klein JB, Piao L, …, Li W, Shi X, Kutateladze TG: KDM5B demethylase binds to its histone target and the product through distinct modules.
    Cell Reports. Accepted.

    2013

  4. Chen K, Xi Y, Pan X, Dent S, He X, Li W*: DANPOS: Dynamic Analysis of Nucleosome Position and Occupancy by Sequencing.
    Genome Res. 23 (2013) 341-351. BCM News; Epigenie Headline

  5. Wang L, Park JH, Wang S, Kocher JP, Li W*: CPAT: Coding-Potential Assessment Tool Using an Alignment-Free Logistic Regression Model.
    Nucleic Acids Res. 41 (2013) e74.

  6. Lin X, Sun D, Rodriguez B, Zhao Q, Sun H, Zhang Y, Li W*: BseQC: Quality Control of bisulfite sequencing experiments.
    Bioinformatics 29 (2013) 3227-3229. PMCID: PMC3842756 .

  7. Chen K^, Wilson MA^, Hirsch C, Watson A, Liang S, Lu Y, Li W*, Dent S*: Stabilization of the Promoter Nucleosomes in Nucleosome Free Region by the Yeast Ssn6-Tup1 Corepressor.
    Genome Res. 23 (2013) 312-322.

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