SBB09 Construct5: Difference between revisions

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Construction of {a~eaeA_Display>} basic part
Construction of {a~Inv-native>} basic part
PCR Bhs001F/Bhs002R on E. coli strain 0157:H7    (145 bp, gp = A)
PCR Bhs001F/Bhs002R on E. coli strain 0157:H7    (145 bp, gp = A)
PCR Bhs002F/Bhs003R on E. coli strain 0157:H7    (1888 bp, gp = B)
PCR Bhs002F/Bhs003R on E. coli strain 0157:H7    (1888 bp, gp = B)
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PCR Bhs001F/Bhs003R on A+B                      (2008 bp, EcoRI/BamHI)
PCR Bhs001F/Bhs003R on A+B                      (2008 bp, EcoRI/BamHI)
Digest pBca9495CA-Bca1144#5                      (EcoRI/BamHI, 3039+910, L)
Digest pBca9495CA-Bca1144#5                      (EcoRI/BamHI, 3039+910, L)
Product is pBca9495CA-M10024                    {a~eaeA_Display>}
Product is pBca9495CA-M10024                    {a~Inv-native>}
----------------------------
----------------------------
Bhs001F  Forward EcoRI for a~eaeA_Display>          cccaaGAATTCatgAGATCTtaacATGATTACTCATGGTTG
Bhs001F  Forward EcoRI for {a~Inv-native>}           cccaaGAATTCatgAGATCTtaacATGATTACTCATGGTTG
Bhs002F  Removing the EcoRI site from eaeA_Display   GTTAATCAGAAcTCATTTGCAAATG
Bhs002F  Removing the EcoRI site from {a~Inv-native>}   GTTAATCAGAAcTCATTTGCAAATG
Bhs002R  Removing the EcoRI site from eaeA_Display   CATTTGCAAATGAgTTCTGATTAAC
Bhs002R  Removing the EcoRI site from {a~Inv-native>}   CATTTGCAAATGAgTTCTGATTAAC
Bhs003R  Reverse BamHI for a~eaeA_Display>          GCAAAggatccGCCTTGGTTTGATCAAAAAATATAACCGCAC
Bhs003R  Reverse BamHI for {a~Inv-native>}           GCAAAggatccGCCTTGGTTTGATCAAAAAATATAACCGCAC
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   JCA:  There is a frame error on Bhs003R.  Revised:
   JCA:  There is a frame error on Bhs003R.  Revised:
<pre>
<pre>
Construction of {a~eaeA_Display>} basic part
Construction of {a~Inv-native>} basic part
PCR Bhs001F/Bhs002R on E. coli strain 0157:H7    (146 bp, gp = A)
PCR Bhs001F/Bhs002R on E. coli strain 0157:H7    (146 bp, gp = A)
PCR Bhs002F/Bhs003R on E. coli strain 0157:H7    (1889 bp, gp = B)
PCR Bhs002F/Bhs003R on E. coli strain 0157:H7    (1889 bp, gp = B)
Line 22: Line 22:
PCR Bhs001F/Bhs003R on A+B                      (2009 bp, EcoRI/BamHI)
PCR Bhs001F/Bhs003R on A+B                      (2009 bp, EcoRI/BamHI)
Digest pBca9495CA-Bca1144#5                      (EcoRI/BamHI, 3039+910, L)
Digest pBca9495CA-Bca1144#5                      (EcoRI/BamHI, 3039+910, L)
Product is pBca9495CA-M10024                    {a~eaeA_Display>}
Product is pBca9495CA-M10024                    {a~Inv-native>}
----------------------------
----------------------------
Bhs001F  Forward EcoRI for a~eaeA_Display>           cccaaGAATTCatgAGATCTtaacATGATTACTCATGGTTG
Bhs001F  Forward EcoRI for {a~Inv-native>}          cccaaGAATTCatgAGATCTtaacATGATTACTCATGGTTG
Bhs002F  Removing the EcoRI site from eaeA_Display   GTTAATCAGAACTCATTTGCAAATGG
Bhs002F  Removing the EcoRI site from {a~Inv-native>}   GTTAATCAGAACTCATTTGCAAATGG
Bhs002R  Removing the EcoRI site from eaeA_Display  CCATTTGCAAATGAGTTCTGATTAAC
Bhs002R  Removing the EcoRI site from {a~Inv-native>}  CCATTTGCAAATGAGTTCTGATTAAC
Bhs003R  Reverse BamHI for a~eaeA_Display>           GCAAAggatccGGCCTTGGTTTGATCAAAAAATATAACCGCAC
Bhs003R  Reverse BamHI for {a~Inv-native>}          GCAAAggatccGGCCTTGGTTTGATCAAAAAATATAACCGCAC
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Revision as of 19:15, 9 May 2009

Construction of {a~Inv-native>} basic part
PCR Bhs001F/Bhs002R on E. coli strain 0157:H7     (145 bp, gp = A)
PCR Bhs002F/Bhs003R on E. coli strain 0157:H7     (1888 bp, gp = B)
----------------------------
PCR Bhs001F/Bhs003R on A+B                       (2008 bp, EcoRI/BamHI)
Digest pBca9495CA-Bca1144#5                      (EcoRI/BamHI, 3039+910, L)
Product is pBca9495CA-M10024                     {a~Inv-native>}
----------------------------
Bhs001F  Forward EcoRI for {a~Inv-native>}           cccaaGAATTCatgAGATCTtaacATGATTACTCATGGTTG
Bhs002F  Removing the EcoRI site from {a~Inv-native>}   GTTAATCAGAAcTCATTTGCAAATG
Bhs002R  Removing the EcoRI site from {a~Inv-native>}   CATTTGCAAATGAgTTCTGATTAAC
Bhs003R  Reverse BamHI for {a~Inv-native>}           GCAAAggatccGCCTTGGTTTGATCAAAAAATATAACCGCAC
 JCA:  There is a frame error on Bhs003R.  Revised:
Construction of {a~Inv-native>} basic part
PCR Bhs001F/Bhs002R on E. coli strain 0157:H7     (146 bp, gp = A)
PCR Bhs002F/Bhs003R on E. coli strain 0157:H7     (1889 bp, gp = B)
----------------------------
PCR Bhs001F/Bhs003R on A+B                       (2009 bp, EcoRI/BamHI)
Digest pBca9495CA-Bca1144#5                      (EcoRI/BamHI, 3039+910, L)
Product is pBca9495CA-M10024                     {a~Inv-native>}
----------------------------
Bhs001F  Forward EcoRI for {a~Inv-native>}          cccaaGAATTCatgAGATCTtaacATGATTACTCATGGTTG
Bhs002F  Removing the EcoRI site from {a~Inv-native>}   GTTAATCAGAACTCATTTGCAAATGG
Bhs002R  Removing the EcoRI site from {a~Inv-native>}  CCATTTGCAAATGAGTTCTGATTAAC
Bhs003R  Reverse BamHI for {a~Inv-native>}          GCAAAggatccGGCCTTGGTTTGATCAAAAAATATAACCGCAC