papers of the month
02/09
- cd - Bentkova & Hejatko - Review: Hormone interactions at the root apical meristem. Plant Mol Biol [1]
- cd - Kuppusamy et al. -Review: Cross-regulatory mechanisms in hormone signaling. Plant Mol Biol [2]
- mq - Qiao/Ecker: Interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis. Genes Dev online early
- mq - Jansen et al.: Defining gene and QTL networks. Current Opin Plant Biol 12:1-6
- mq - Balasubramanian/Weigel: QTL Mapping in new arabidopsis thaliana advanced intercross-recombinant inbred lines. PLoS1 4:e4318
- mq - Volkov et al.: Biologically Closed Electrical Circuits in Venus Flytrap. Plant Phys online early
- mq - Wang/Spalding: HYPOTrace: image analysis software for measuring hypocotyl growth and shape demonstrated on Arabidopsis seedlings undergoing photomorphogenesis. Plant Phys online early
- mq - Pernisova et al.: Cytokinins modulate auxin-induced organogenesis in plants via regulation of the auxin efflux. PNAS online early
- mq - Pan et al.: The E3 Ubiquitin Ligase SCFTIR1/AFB and Membrane Sterols Play Key Roles in Auxin Regulation of Endocytosis, Recycling, and Plasma Membrane Accumulation of the Auxin Efflux Transporter PIN2 in Arabidopsis thaliana. Plant Cell online early
01/09
- cd - Perez-Torres et al.: Phosphate Availability Alters Lateral Root Development in Arabidopsis by Modulating Auxin Sensitivity via a Mechanism Involving the TIR1 Auxin Receptor. Plant Cell [3]
- mq - Laskowski/Scheres: Root System Architecture from Coupling Cell Shape to Auxin Transport. PLoS Biology 6:e307
- mq - Titapiwatanakun/Murphy: ABCB19/PGP19 stabilises PIN1 in membrane microdomains in Arabidopsis. Plant J 57:27
- mq - Loudet/Chory: A zinc knuckle protein that negatively controls morning-specific growth in Arabidopsis thaliana. PNAS 105:17193 pdf bei mir
- mq - Perez-Torres/Herrera-Estrella: Phosphate Availability Alters Lateral Root Development in Arabidopsis by Modulating Auxin sensitivity via a Mechanism Involving the TIR1 Auxin Receptor. Plant Cell online early
- mq - Gilkerson/Callis: Isolation and Characterization of cul1-7, a Recessive Allele of CULLIN1 that Disrupts SCF Function at the C-terminus of CUL1 in Arabidopsis thaliana. Genetics online early
- mq - Li/Guilfoyle: Constitutive Repression and Activation of Auxin Signaling in Arabidopsis. Plant Phys online early
- mq - Pandey/Assmann - Two Novel GPCR-Type G Proteins Are Abscisic Acid Receptors in Arabidopsis. Cell 136, 9:136
- mq - Jorgensen/Emerson: Functional variation in a disease resistance gene in populations of Arabidopsis thaliana. Molecular Ecology 17:4912
- mq - : Grunewald et al.: Parasitic nematodes modulate PIN-mediated auxin transport to facilitate infection. PLoS Pathogens 5:e1000266
- mq - Stuttmann/Noel: COP9 signalosome- and 26S Proteasome-dependent regulation of SCFTIR1 accumulation in Arabidopsis. JBC online early
- mq - Cecchetti et al.: Auxin regulates Arabidopsis anther dehiscence, pollen maturation, and filament elongation. Plant Cell online early
- mq - Ogata et al.: KAGIANA: An Excel-Based Tool for Retrieving Summary Information on Arabidopsis Genes. Plant and Cell Physiology 50:173
- mq - Grunewald et al.: Parasitic Nematodes Modulate PIN-Mediated Auxin Transport to Facilitate Infection. PLoS Pathogens 5:e1000266
- mq - Chung/Howe: A critical role for the TIFY motif in repression of jasmonate signaling by repression of a stabilized splice variant of JASMONATE ZIM-domain protein JAZ10 in Arabidopsis. Plant Cell online early
- mq - Lister/Ecker: Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond. Current Opinion in Plant Biology online early
- mq - Chandler: Local auxin production: a small contribution to a big field. Bioassays 31:60
- mq - Pressoir et al.: Natural variation in maize architecture is mediated by allelic differences at the PINOID co-ortholog barren inflorescence2. Plant J online early
- mq - Orsi and Tanksley: Natural variation in an ABC transporter gene associated with seed size evolution in tomato species. PLoS Genetics 5:e1000347
- mq - Barkoulas/Tsiantis: A developmental framework for dissected leaf formation in the Arabidopsis relative Cardamine hirsuta. Nature Genetics 40:1136
- mq - Fu et al.: System-wide molecular evidence for phenotypic buffering in Arabidopsis. Nature Genetics online early
- mq - Zourelidou/Schwechheimer: The polarly localized D6 PROTEIN KINASE is required for efficient auxin transport in Arabidopsis thaliana. Development 136:627
12/08
- mq - Cheng/Zhao: NPY genes and AGC kinases define two key steps in auxin-mediated organogenesis in Arabidopsis. PNAS online early
- mq - Bari & Jones: Role of plant hormones in plant defence responses. Plant Mol Biol 2009 online early
- mq - Dilkes et al.: The Maternally Expressed WRKY Transcription Factor TTG2 Controls Lethality in Interploidy Crosses of Arabidopsis. PLoS Biology 6:e308
- mq - Zhen & Ungerer: Relaxed selection on the CBF/DREB1 regulatory genes and reduced freezing tolerance in the southern range of Arabidopsis thaliana. Mol Biol Evol 25:2547
- mq - Nordborg/Weigel: Next-generation genetics in plants. Nature 456:720
- mq - Rockman: Reverse engineering the genotype-phenotype map with natural genetic variation. Nature 456:738
- mq - Donnelly: Progress and challenges in genome-wide association studies in humans. Nature 456:728
- mq - Gao et al.: Cell Polarity Signaling: Focus on Polar Auxin Transport. Mol Plant 1:899
11/08
- mq - Ditengou/Palme: Mechanical induction of lateral root initiation in Arabidopsis thaliana. PNAS online early
- mq - Song et al.: Comprehensive expression profiling analysis of OsIAA gene family in developmental processes and in response to phytohormone and stress treatments. Planta online early
- mq - Ludwig-Müller/Reski: Moss (Physcomitrella patens) GH3 proteins act in auxin homeostasis. New Phytol online early
- mq - Russo et al.: Phytochemical and genetic analyses of ancient cannabis from Central Asia. JXB 59:4171
- mq - Shimada/Matsuoka: Structural basis for gibberellin recognition by its receptor GID1. Nature 456:520
- mq - Murase et al.: Gibberellin-induced DELLA recognition by the gibberellin receptor GID1. Nature 456:459
- mq - Hedden: Gibberellins close the lid. Nature 456:455
- mq - Zhang/Borevitz: Whole genome transcriptome polymorphisms in Arabidopsis thaliana. Genome Biology online early
- mq - Dietrich et al.: Mutations in the Arabidopsis Peroxisomal ABC Transporter COMATOSE Allow Differentiation between Multiple Functions in planta: Insights from an Allelic Series. Mol Biol Cell online early
- mq - Gao: Cell Polarity Signaling: Focus on Polar Auxin Transport. Molecular Plant online early
- mq - Shindo/Hardtke: Intraspecific competition reveals conditional fitness effects of single gene polymorphism at the Arabidopsis root growth regulator BRX. New Phytol 180:71
- mq - Peng et al.: Arabidopsis Hormone Database: a comprehensive genetic and phenotypic information database for plant hormone research in Arabidopsis. Nucleic Acids Res online early
- mq - Geldner: Cell polarity in plants-a PARspective on PINs. Curr Opin Plant Biol 2008, 12:1-7
- mq - Loudet/Chory: A zinc knuckle protein that negatively controls morning-specific growth in Arabidopsis thaliana. PNAS online early
- mq - Michael/Chory: A morning-specific phytohormone gene expression program underlying rhythmic plant growth. PLoS Biology 16:e225
10/08
09/08
- mq - Souer et al.: Patterning of Inflorescences and Flowers by the F-Box Protein DOUBLE TOP and the LEAFY Homolog ABERRANT LEAF AND FLOWER of Petunia. Plant Cell 20:2033
- mq - marion et al.: Systematic analysis of protein subcellular localization and interaction using high-throughput transient transformation of Arabidopsis seedlings. Plant J online early
- mq - Ossowski et al.: Sequencing of natural strains of Arabidopsis thaliana with short reads. Genome Research online early
- mq - Zhang et al.: Flavones and flavonols play distinct critical roles during nodulation of Medicago truncatula by Sinorhizobium meliloti. Plant J online early
- mq - Mravec et al.: Interaction of PIN and PGP transport mechanisms in auxin distribution-dependent development. Development online early
- mq - Carrier et al.: The Binding of Auxin to the Arabidopsis Auxin Influx Transporter AUX1. Plant Phys 148:529
08/08
- mq - Udvardi et al.: Eleven Golden Rules of Quantitative RT-PCR. Plant Cell 20:1736
- mq - Lau et al.: The Evolving Complexity of the Auxin Pathway. Plant Cell 20:1738
- mq - Hirano et al.: Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice. Plant & Cell Phys online early
- mq - Souer et al.: Patterning of Inflorescences and Flowers by the F-Box Protein DOUBLE TOP and the LEAFY Homolog ABERRANT LEAF AND FLOWER of Petunia. Plant Cell online early
- mq - Rubin: Genomics of cellulosic biofuels. Nature online early
- mq - Lee et al.: Hormone- and light-regulated nucleocytoplasmic transport in plants: current status. Journal of Experimental Botany online early
- mq - Gomez-Roldan et al.: Strigolactone inhibition of shoot branching. Nature online early
- mq - Umehara et al.: Inhibition of shoot branching by new terpenoid plant hormones. Nature online early
- mq - Simon et al.: Quantitative trait loci mapping in five new large recombinant inbred line populations of Arabidopsis thaliana genotyped with consensus single-nucleotide polymorphism markers. Genetics 178:2253
- mq - Laserna et al.: Light-related Loci Controlling Seed Germination in Ler x Cvi and Bay-0 x Sha Recombinant Inbred-line Populations of Arabidopsis thaliana. Ann Bot online early
- mq - Feraru/Friml: PIN Polar Targeting. Plant Phys 147:1553
07/08
- mq - Raikhel: 2020 Vision for Biology: The Role of Plants in Addressing Grand Challenges in Biology. Molecular Plant 1:561
- mq - Spoel and Dong: Making sense of hormone crosstalk during plant immune responses. Cell Host Microbe 3:348
- mq - Cecchetti et al.: Auxin Regulates Arabidopsis Anther Dehiscence, Pollen Maturation, and Filament Elongation. Plant Cell online early
- mq - Shindo et al.: Intraspecific competition reveals conditional fitness effects of single gene polymorphism at the Arabidopsis root growth regulator BRX. New Phytologist online early
- mq - Bouchabke et al.: Natural variation in Arabidopsis thaliana as a tool for highlighting differential drought responses. PLoS1 3:e1705
- mq - Swarup et al.: The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology online early
- mq - Vert et al.: Integration of auxin and brassinosteroid pathways by Auxin Response Factor 2. PNAS online early
- mq - Zhang et al.: Genetic analysis of CAND1-CUL1 interactions in Arabidopsis supports a role for CAND1-mediated cycling of the SCFTIR1 complex. PNAS 105:8470-8475
- cd - Müller and Sheen: Cytokinin and auxin interaction in root stem-cell specification during early embryogenesis. Nature 453: 1094-1097
- cd - Dubrovsky et al.: Auxin acts as a local morphogenetic trigger to specify lateral root founder cells. PNAS 105: 8790-8794
06/08
- mq - Francois et al.: Demographic History of European Populations of Arabidopsis thaliana. PLoS Genetics 4:e1000075.
- mq - Harmon et al.: CUL1 regulates TOC1 protein stability in the Arabidopsis circadian clock. Plant Journal online early
- mq - Ivanchenko et al.: Ethylene–auxin interactions regulate lateral root initiation and emergence in Arabidopsis thaliana. Plant Journal online early
- mq - Benedito/Udvardi et al.: A gene expression atlas of the model legume Medicago truncatula. Plant Journal online early
- mq - Llorente et al.: Repression of the Auxin Response Pathway Increases Arabidopsis Susceptibility to Necrotrophic Fungi. Molecular Plant 1:496
05/08
- mq - Goda et al.: The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access. Plant Journal online early
- mq - Lisec et al.: Identification of metabolic and biomass QTL in Arabidopsis thaliana in a parallel analysis of RIL and IL populations. Plant Journal 53:960
- mq - Negi et al.: Ethylene regulates lateral root formation and auxin transport in Arabidopsis thaliana. Plant Journal online early
- cd - Schreiner et al.: Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction. Nature 453: 548-552
- cd - Husnjak et al.: Proteasome subunit Rpn13 is a novel ubiquitin receptor. Nature 453: 481-488
- mq - Kandasamy/Meagher et al.: ACTIN-RELATED PROTEIN8 Encodes an F-Box Protein Localized to the Nucleolus in Arabidopsis. Plant, Cell & Physiology 49:858 full text
- mq - Baxter/Salt et al.: Variation in Molybdenum Content Across Broadly Distributed Populations of Arabidopsis thaliana Is Controlled by a Mitochondrial Molybdenum Transporter (MOT1). PLoS Genetics 4:e1000004
- mq - Duan/Wu et al.: Characterization of a sub-family of Arabidopsis genes with the SPX domain reveals their diverse functions in plant tolerance to phosphorus starvation. Plant Journal online early
- mq - Sicard et al.: Identification of quantitative trait loci controlling symptom development during viral infection in Arabidopsis thaliana. MPMI 21:198 abstract (pdf bei mir)
04/08
- mq - Nilsson/Bhalearo et al.: Dissecting the Molecular Basis of the Regulation of Wood Formation by Auxin in Hybrid Aspen. Plant Cell online early
- mq - Zeng et al.: Genetic analysis of the physiological responses to low boron stress in Arabidopsis thaliana. Genetic analysis of the physiological responses to low boron stress in Arabidopsis thaliana. Plant, Cell & Environment 31:12
- mq - Kleine-Vehn/Friml et al.: ARF GEF-Dependent Transcytosis and Polar Delivery of PIN Auxin Carriers in Arabidopsis. Current Biology 18:526 abstract
- mq - Groll et al.: A plant pathogen virulence factor inhibits the eukaryotic proteasome by a novel mechanism. Nature 452:755 abstract
- cd - Hayashi et al.: Small-molecule agonists and antagonists of F-box protein–substrate interactions in auxin perception and signaling. PNAS 105:5632 abstract
- mq - Tao/Chory et al.: Rapid Synthesis of Auxin via a New Tryptophan-Dependent Pathway Is Required for Shade Avoidance in Plants. Cell 133:164
- mq - Stepanova/Alonso et al.: TAA1-Mediated Auxin Biosynthesis Is Essential for Hormone Crosstalk and Plant Development. Cell 133:177
- mq - Ishihara/Wakasa et al.: The tryptophan pathway is involved in the defense responses of rice against pathogenic infection via serotonin production. Plant Journal online early
03/08
- mq - Bainbridge/Kuhlemeier et al.: Auxin influx carriers stabilize phyllotactic patterning Genes & Development 22:810
- mq - West/Michelmore et al.: High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis Genome Research 16:787
- mq - Derbyshire/Dolan et al.: Proximal–distal patterns of transcription factor gene expression during Arabidopsis root development Journal of Experimental Botany 59:235
- mq - Ongaro/Leyser et al.: Interactions between Axillary Branches of Arabidopsis Molecular Plant 1:388
- mq - Papanov/Palme et al.: Comprehensive Transcriptome Analysis of Auxin Responses in Arabidopsis Molecular Plant 1:321
- mq - Teale/Palme et al.: Auxin as a Model for the Integration of Hormonal Signal Processing and Transduction Molecular Plant 1:229
- mq - Lisec/Wilmitzer et al.: Identification of metabolic and biomass QTL in Arabidopsis thaliana in a parallel analysis of RIL and IL populations Plant Journal 53:960
- mq - Salmon/Callis et al.: Degradation of the auxin response factor ARF1 Plant Journal 54:118
- mq - Kliebenstein: A Role for Gene Duplication and Natural Variation of Gene Expression in the Evolution of Metabolism Plos1 3:e1838
- mq - Szemenyei/Long et al.: TOPLESS Mediates Auxin-Dependent Transcriptional Repression During Arabidopsis Embryogenesis Science 319:384
- mq - Hansen/Kliebenstein et al.: Identifying the molecular basis of QTLs: eQTLs add a new dimension TIPS 13:72
- mq - van den Burg/Jones et al.: The F-Box Protein ACRE189/ACIF1 Regulates Cell Death and Defense Responses Activated during Pathogen Recognition in Tobacco and Tomato Plant Cell online early
- mq - Zhang/Borevitz et al.: Global Analysis of Genetic, Epigenetic and Transcriptional Polymorphisms in Arabidopsis thaliana Using Whole Genome Tiling Arrays Plos Genetics 4:e1000032
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