Prbbbb:vector pcr
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Overview
PCR reaction to generate linearized construction vector backbones for Fusion(Freiburg)-formatted Biobrick assemblies.
Materials
- 100 ul + PCR tubes
- Phusion HotStart Polymerase 2 U/ul
- Phusion HF Buffer 5x
- dNTP mix 10mM each nucleotide
- ddH2O
- reverse prefix primer rg0301 (fusion format)
- reverse suffix primer rg0302 (fusion format)
- vector template DNA
- pSB1AC3F -- BBa_J18901
- pSB1AK3F -- BBa_J18902
- pSB1AT3F -- BBa_J18903
Procedure
- Step 1: *setup PCR reaction*
µl, single reaction | 3.5xMaster | 10xMaster | |
---|---|---|---|
H2O | 76µl | 266 | 760 |
5x HF Buffer | 20µl | 70 | 200 |
10mM dNTP | 2µl | 70 | 200 |
rg0301 100 µM | 0.5µl | 1.75 | 5 |
rg0302 100 µM | 0.5µl | 1.75 | 5 |
Phusion | 1µl | 3.5 | 10 |
template DNA | 0.1µl | -- | -- |
- Step 2: *PCR program*
30"@98C; 35x (10"@98°C; 15"@68C; 1'30"@72C); 10'@72C; inf. 4C
- Keep at 4°C.
- Step 3
- Step 3 has multiple sub-steps within it.
- Enumerate each of those.
Notes
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References
Relevant papers and books
- Goldbeter A and Koshland DE Jr. An amplified sensitivity arising from covalent modification in biological systems. Proc Natl Acad Sci U S A. 1981 Nov;78(11):6840-4. DOI:10.1073/pnas.78.11.6840 |
- JACOB F and MONOD J. Genetic regulatory mechanisms in the synthesis of proteins. J Mol Biol. 1961 Jun;3:318-56. DOI:10.1016/s0022-2836(61)80072-7 |
- ISBN:0879697164
Contact
- Who has experience with this protocol?
or instead, discuss this protocol.