Pecinka lab: Difference between revisions
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{{Template:Pecinka Lab}} | {{Template:Pecinka Lab}} | ||
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<h3><font style="color:#31B404;">Research</font></h3> | |||
The Pecinka lab is hosted by the [http://www.mpipz.mpg.de/10574/koornneef-dpt Department of Plant Breeding and Genetics] at the [http://www.mpipz.mpg.de/2169/en Max Planck Institute for Plant Breeding Research] in Cologne, Germany. | |||
Our goal is to understand molecular and evolutionary mechanisms shaping plant genomes and epigenomes. We analyze how DNA sequence and chromatin changes are generated by endo- and exogenous factors and how these forces are balanced by the genome repair and epigenetic mechanisms. To this end we use mainly the model plant ''Arabidopsis thaliana'' and several other ''Brassicaceae'' and analyze them by forward and reverse genetics, molecular, biochemical, cytogenetic and bioinformatic methods. | |||
[[Pecinka_lab:Research | read more...]] | |||
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<h3><font style="color:#4169E1;">Lab Members</font></h3> | |||
*[[Pecinka_lab:Ales_Pecinka|Ales Pecinka]] | |||
*[[Pecinka_lab:Heinrich Bente|Heinrich Bente]] | |||
*[[Pecinka_lab:Mariana_Diaz|Mariana Andrea Diaz Smoje]] | |||
*[[Pecinka_lab:Andreas_Finke|Andreas Finke]] | |||
*[[Pecinka_lab:Chun Hsin Liu|Chun Hsin Liu (Phoebe)]] | |||
*[[Pecinka_lab:Catarine Markus|Catarine Markus]] | |||
*[[Pecinka_lab:Kashif Nawaz|Kashif Nawaz]] | |||
*[[Pecinka_lab:Bjoern_Pietzenuk|Björn Pietzenuk]] | |||
<h3><font style="color:#4169E1;">Technitians</font></h3> | |||
*[[Pecinka_lab:Barbara_Eilts|Barbara Eilts]] | |||
*[[Pecinka_lab:Petra_Pecinkova|Petra Pecinkova]] | |||
[[Pecinka_lab:People|see complete list...]] | |||
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<h3><font style="color:#FF8C00;">Recent Publications</font></h3> | <h3><font style="color:#FF8C00;">Recent Publications</font></h3> | ||
*Pecinka A, | *Cao H.X., Schmutzer T, Scholz U, Pecinka A, Schubert I, Vu G.T.H. (2015): Metatranscriptome analysis reveals host-microbiome interactions in traps of carnivorous Genlisea species. Frontiers in Microbiology doi: 10.3389/fmicb.2015.00526 [http://journal.frontiersin.org/article/10.3389/fmicb.2015.00526/abstract Open access] | ||
* | *Liu C-H, Finke A, Diaz M, Rozhon W, Poppenberger B, Baubec T, Pecinka A. (2015): Repair of DNA Damage Induced by the Cytidine Analog Zebularine Requires ATR and ATM in Arabidopsis. Plant Cell doi/10.1105/tpc.114.135467 [http://www.plantcell.org/content/early/2015/05/28/tpc.114.135467.full.pdf+html Open access]. | ||
*Baranauskė S, Mickutė M, Plotnikova A, Finke A, Venclovas Č, Klimašauskas S, Vilkaitis G. (2015): Functional mapping of the plant small RNA methyltransferase: HEN1 physically interacts with HYL1 and DICER-LIKE 1 proteins. Nucleic Acids Research 43:2802-2812 [http://nar.oxfordjournals.org/content/43/5/2802.long Full text] | |||
* | *Willing, Rawat et al. (2015): Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation. Nature Plants 1:1-7 [http://www.nature.com/articles/nplants201423 Full text] | ||
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*[[Pecinka_lab:Publications|see complete list...]] | |||
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<h3><font style="color:red">News</font></h3> | <h3><font style="color:red">News</font></h3> | ||
* | *2015-07-16: There is plenty of microbial life inside carnivorous plant traps [http://journal.frontiersin.org/article/10.3389/fmicb.2015.00526/abstract ...] | ||
* | *2015-07-01: Kashif starts his PhD on stress induced chromatin changes. | ||
* | *2015-06: Thomas leaving the lab, Henrich starting his masters and Catarine joining the group for one year of her PhD. | ||
*2015-06: Ahmed and Phoebe defended their PhD work at University of Göttingen and Cologne, respectively. Congratulations! | |||
*2015-06: Not only DNA demethylation - cytidine analog zebularine triggers DNA damage response in Arabidopsis. Read more in our recent Plant Cell paper [http://www.plantcell.org/content/early/2015/05/28/tpc.114.135467.full.pdf+html PDF] | |||
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Revision as of 12:18, 21 August 2015
Centre of Plant Structural and Functional Genomics |
ResearchThe Pecinka lab is hosted by the Department of Plant Breeding and Genetics at the Max Planck Institute for Plant Breeding Research in Cologne, Germany.
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Lab Members
Technitians
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