Pecinka Lab

Centre of Plant Structural and Functional Genomics Institute of Experimental Botany of the Czech Academy of Sciences, v. v. i. Šlechtitelů 31 Olomouc, CZ-783 71 Czech Republic Contact

Home      Research      People      Publications      Protocols      Resources      Seminars      Positions      Lab life     

Research The goal of Pecinka lab is to understand molecular basis of mechanisms shaping plant genomes. We focus in particular on DNA repair and inactivation of repetitive DNA that both have potential to cause large genomic chages. To this end we use model species Arabidopsis thaliana and several other Brassicaceae and analyze them using forward and reverse genetics, molecular, biochemical, cytogenetic and bioinformatic methods. Pecinka lab is hosted by the Department of Plant Breeding and Genetics at the Max Planck Institute for Plant Breeding Research in Cologne, Germany. Our wiki site was developed under OpenWetWare, an open access effort to promote the sharing of information among researchers working in biology. read more... Recent Publications Pecinka A, Mittelsten Scheid O. Stress-induced chromatin changes: A critical view on their heritability. Plant Cell Physiology doi: 10.1093/pcp/pcs044 (2012). [1] Alcázar R, Pecinka A, Aarts MGM, Fransz PF, Koornneef M. Signals of speciation within Arabidopsis thaliana in comparison with its relatives. Curr Opin Plant Biol 15:205-211 (2012). [2] Pecinka A, Fang W, Rehmsmeier M, Levy AA, Mittelsten Scheid O. Polyploidization increases meiotic recombination frequency in Arabidopsis. BMC Biology 9:24 (2011). [3] Pecinka A, Dinh HQ, Rosa M, Baubec T, Lettner N, Mittelsten Scheid O. Epigenetic control of repetitive elements is attenuated by prolonged heat stress in Arabidopsis. Plant Cell 22: 3118–3129 (2010). [4] Pecinka A, Rosa M, Schikora A, Berlinger M, Hirt H, Luschnig C, Mittelsten Scheid O. Transgenerational stress memory is not a general response in Arabidopsis. PLoS One 4:e5202 (2009). [5] see complete list...	Seminars Group meeting, journal clubs, and seminars
News 2012-06-07: Pecinka lab website starts to run on OpenWetWare 2012-03-28: The review on Stress-Induced Chromatin Changes was published in PCP [6] 2012-01: The review by Alcazar et al. on Signals of speciation in Arabidopsis and its relatives was published in COPB [7] 2011-09: Grant on Epigenetic Control of Repetitive DNA in Arabidopsis lyrata funded by DFG
http://www4.clustrmaps.com/stats/maps-no_clusters/openwetware.org-wiki-Pecinka_Lab-thumb.jpg	Lab Members Ahmed Abdelsamad Chun Hsin Liu (Phoebe) Ales Pecinka Björn Pietzenuk Thomas Piofczyk Giang Vu Visiting Students Pawel Mikulski Miriam Schleinitz Technitians Barbara_Eilts Petra Pecinkova Alumni Alexander Schott Anastasia Hoffmann See all former members...

Recent Publications Pecinka A, Mittelsten Scheid O. Stress-induced chromatin changes: A critical view on their heritability. Plant Cell Physiology doi: 10.1093/pcp/pcs044 (2012). [8] Alcázar R, Pecinka A, Aarts MGM, Fransz PF, Koornneef M. Signals of speciation within Arabidopsis thaliana in comparison with its relatives. Curr Opin Plant Biol 15:205-211 (2012). [9] Pecinka A, Fang W, Rehmsmeier M, Levy AA, Mittelsten Scheid O. Polyploidization increases meiotic recombination frequency in Arabidopsis. BMC Biology 9:24 (2011). [10] Pecinka A, Dinh HQ, Rosa M, Baubec T, Lettner N, Mittelsten Scheid O. Epigenetic control of repetitive elements is attenuated by prolonged heat stress in Arabidopsis. Plant Cell 22: 3118–3129 (2010). [11] Pecinka A, Rosa M, Schikora A, Berlinger M, Hirt H, Luschnig C, Mittelsten Scheid O. Transgenerational stress memory is not a general response in Arabidopsis. PLoS One 4:e5202 (2009). [12] see complete list...	Seminars Group meeting, journal clubs, and seminars
	News 2012-06-07: Pecinka lab website starts to run on OpenWetWare 2012-03-28: The review on Stress-Induced Chromatin Changes was published in PCP [13] 2012-01: The review by Alcazar et al. on Signals of speciation in Arabidopsis and its relatives was published in COPB [14] 2011-09: Grant on Epigenetic Control of Repetitive DNA in Arabidopsis lyrata funded by DFG
	http://www4.clustrmaps.com/stats/maps-no_clusters/openwetware.org-wiki-Pecinka_Lab-thumb.jpg