Nescent ngs 2011:Notebook/nescent ngs 2011

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==Useful Links==
==Useful Links==
* [http://seqanswers.com/wiki/SEQanswers SEQanswers Wiki]
* [http://seqanswers.com/wiki/SEQanswers SEQanswers Wiki]
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* [http://molecularevolution.org/ molecularevolution.org]

Revision as of 13:17, 31 August 2011

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Welcome!

  • Share notes and comments from the course!
  • Nescent hosted course materials are here

Notes

Please add notes by topic:

  • Library prep and platform related
  • Quality Control

FASTX-Toolkit

  • Assembly, de novo

SOAPdenovo

  • Alignment

Bowtie Novoalign

  • RAD
  • Gene discovery and annotation
  • Variant calling
  • RNA-seq
  • Phylogenomics
  • Further analyses

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