Mimulus Community: Difference between revisions

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==The ''Mimulus'' Genome==
==The ''Mimulus'' Genome==
The Joint Genome Institute (JGI/DOE) completed 7X coverage of the ''Mimulus'' genome in Spring 2007.  An assembly of the 7x genome was completed in Summer 2008.  Members of the ''Mimulus'' Community are currently annotating the Genome.  The ''Mimulus'' Genome can be accessed though the private intranet at [http://www.mimulusevolution.org/ Mimulus Evolution].  This is currently a private site, but will be open to the public soon.
The Joint Genome Institute (JGI/DOE) completed 7X coverage of the ''Mimulus'' genome in Spring 2007.  An assembly of the 7x genome was completed in Summer 2008.  Members of the ''Mimulus'' Community are currently annotating the Genome and working on a final assembly of the sequenced scaffolds.  The ''Mimulus'' Genome can be accessed though [http://www.phytozome.net/ Phytozome].


==People==
==People==
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*[http://www.genetics.forestry.ubc.ca/ritland/ Kermit Ritland]
*[http://www.genetics.forestry.ubc.ca/ritland/ Kermit Ritland]
*[http://plantbiology.msu.edu/faculty/faculty-research/doug-schemske/ Doug Schemske]
*[http://plantbiology.msu.edu/faculty/faculty-research/doug-schemske/ Doug Schemske]
*[http://ceeb.uoregon.edu/faculty_pages/Streisfeld.shtml Matt Streisfeld]
*[http://www.ex.ac.uk/~MRMacnai/welcome.html Mark Macnair]
*[http://www.ex.ac.uk/~MRMacnai/welcome.html Mark Macnair]
*[http://www.bio.txstate.edu:16080/~martin/ Noland Martin]
*[http://www.bio.txstate.edu:16080/~martin/ Noland Martin]
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*[http://visionlab.bio.unc.edu/ Todd Vision]
*[http://visionlab.bio.unc.edu/ Todd Vision]
*[http://www.biology.duke.edu/willislab/ John Willis]
*[http://www.biology.duke.edu/willislab/ John Willis]
*[http://biology.richmond.edu/faculty/Wu_Carrie.html Carrie Wu]




|'''Post-Docs'''
|'''Post-Docs'''
 
*[[Arielle Cooley]]
*[http://sites.google.com/site/yaowuyuanswebpage/ Yaowu Yuan]
*[http://evodevo.uoregon.edu/people/blackman.html Ben Blackman]
*[[Camille Barr]]
*[http://www.eeob.iastate.edu/faculty/WendelJ/lexflagel.htm Lex Flagel]
*[http://labs.eeb.utoronto.ca/barrett/Friedman.html Jannice Friedman]
*[http://www.unc.edu/~ganko Eric Ganko]  
*[http://www.unc.edu/~ganko Eric Ganko]  
*[http://purugganan.gnets.ncsu.edu/people/people.html Megan Hall]
*[http://purugganan.gnets.ncsu.edu/people/people.html Megan Hall]
*[http://entomology.wisc.edu/~holeski/ Liza Holeski]
*[http://entomology.wisc.edu/~holeski/ Liza Holeski]
*[http://www-biology.ucsd.edu/~mstreisf/ Matt Streisfeld]
*[http://openwetware.org/wiki/User:Young_Wha_Lee Young Wha Lee]
*[[Mimulus:David Lowry|David Lowry]]
*[http://www.rochester.edu/College/BIO/labs/ORRLAB/andrea.html Andrea Sweigart]
*[http://www.rochester.edu/College/BIO/labs/ORRLAB/andrea.html Andrea Sweigart]
*[http://grad.bio.uci.edu/ecoevo/cwu/ Carrie Wu]
*[http://sites.google.com/site/yaowuyuanswebpage/ Yaowu Yuan]
 
 
 
 
 
 
 
 




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| '''Grad Students'''
| '''Grad Students'''
*[http://ucsu.colorado.edu/%7Ebakerrl/index.html Rob Baker]
*[http://rintintin.colorado.edu/~bakerrl/Rob_Baker_Plant_Evolution_and_Development/Evolution_and_Development_of_Plant_Architecture.html Rob Baker]
*[http://biotype.biology.dal.ca/mjohnst/People.html Magdalena Bartkowska]
*[http://biotype.biology.dal.ca/mjohnst/People.html Magdalena Bartkowska]
*[http://students.washington.edu/kjbyers/ Kelsey Byers]
*[http://www.genetics.forestry.ubc.ca/ritland/people.html Charles Chen]
*[http://www.genetics.forestry.ubc.ca/ritland/people.html Charles Chen]
*[[Arielle Cooley]]
*[[Katie Ferris]]
*[[Katie Ferris]]
*[http://anabaena.net/mimulus.php Naomi Fraga]
*[http://anabaena.net/mimulus.php Naomi Fraga]
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*[[Dena Grossenbacher]]
*[[Dena Grossenbacher]]
*[http://www.eve.ucdavis.edu/systrauss/people.htm Jon Haloin]
*[http://www.eve.ucdavis.edu/systrauss/people.htm Jon Haloin]
*[http://openwetware.org/wiki/User:Young_Wha_Lee Young Wha Lee]
*[[Deborah Lloyd]]  
*[[Deborah Lloyd]]  
*[[Mimulus:David Lowry|David Lowry]]
*[[Jennifer Modliszewski]]
*[[Jennifer Modliszewski]]
*[http://students.washington.edu/crp7/ Christina Pince]
*[http://students.washington.edu/crp7/ Christina Pince]
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==Seed Collections==
==Seed Collections==
Duke University is now the home to the collection of seeds from over 425 populations of ''Mimulus''.  The seed collections are primarily composed of seeds from within the ''Mimulus guttatus'' complex. Most of these seeds can be made available for upon request.  Please allow a few weeks for orders to be fulfilled.  Contact [[David Lowry]] at david.lowry@duke.edu for seed requests.  See the
Duke University is now the home to the collection of seeds from over 425 populations of ''Mimulus''.  The seed collections are primarily composed of seeds from within the ''Mimulus guttatus'' complex. Most of these seeds can be made available for upon request.  Please allow a few weeks for orders to be fulfilled.  [[Media:‎Mimulus_populations_3_22_09.xls|Mimulus collections list]]
[[Media:Mimulus_populations_3_22_09.xls|spreadsheet of collections]] before making requests.


==Techniques==
==Techniques==

Revision as of 13:47, 8 December 2010

Mimulus guttatus

The Mimulus Community

Become a member today.

Announcements

Mimulus Meeting 2006 at Duke University
Mimulus Meeting 2007 at NESCent
  • The Mimulus guttatus IM62 genome assembly and preliminary annotation is now available for search and download from Phytozome.
  • Download the contact info for people who attended the 2007 Mimulus meeting in Durham, NC.
  • There are now 436 Mimulus populations currently stored at the Duke University Seed Stock Center, as of March 2009

The Genus Mimulus

The genus Mimulus (historically "Scrophulariaceae," order Lamiales) has been a model plant system for ecological and evolutionary genetics for over 50 years (Vickery, 1951).

  • Check out the poster of the phylogeny of the Mimulus genus.

The Mimulus Genome

The Joint Genome Institute (JGI/DOE) completed 7X coverage of the Mimulus genome in Spring 2007. An assembly of the 7x genome was completed in Summer 2008. Members of the Mimulus Community are currently annotating the Genome and working on a final assembly of the sequenced scaffolds. The Mimulus Genome can be accessed though Phytozome.

People

Mimulus lewisii and Mimulus cardinalis with hybrids
Labs


Post-Docs







Grad Students





Seed Collections

Duke University is now the home to the collection of seeds from over 425 populations of Mimulus. The seed collections are primarily composed of seeds from within the Mimulus guttatus complex. Most of these seeds can be made available for upon request. Please allow a few weeks for orders to be fulfilled. Mimulus collections list

Techniques

  1. DNA Extraction Protocol
  2. Microsatellite Recipes
  3. Seed Sterilization