Mesoplasma florum:Codon usage
From OpenWetWare
The codon usage table for Mesoplasma florum is here:
Mesoplasma florum L1 [gbbct]: 683 CDS's (245761 codons) AmAcid Codon Number /1000 Fraction ..
Amino acid | Codon | Number | Number / 1000 | Probability | EC Probability | Compromise Probability | ||
Gly | GGG | 848 | 3.45 | 0.06 | ||||
Gly | GGA | 5717 | 23.26 | 0.43 | ||||
Gly | GGT | 6147 | 25.01 | 0.47 | ||||
Gly | GGC | 461 | 1.88 | 0.03 | ||||
Glu | GAG | 1543 | 6.28 | 0.09 | ||||
Glu | GAA | 16303 | 66.34 | 0.91 | ||||
Asp | GAT | 10918 | 44.43 | 0.83 | ||||
Asp | GAC | 2203 | 8.96 | 0.17 | ||||
Val | GTG | 632 | 2.57 | 0.04 | ||||
Val | GTA | 4237 | 17.24 | 0.28 | ||||
Val | GTT | 9660 | 39.31 | 0.65 | ||||
Val | GTC | 344 | 1.40 | 0.02 | ||||
Ala | GCG | 519 | 2.11 | 0.04 | ||||
Ala | GCA | 6198 | 25.22 | 0.46 | ||||
Ala | GCT | 6297 | 25.62 | 0.47 | ||||
Ala | GCC | 522 | 2.12 | 0.04 | ||||
Arg | AGG | 194 | 0.79 | 0.03 | ||||
Arg | AGA | 5448 | 22.17 | 0.80 | ||||
Ser | AGT | 3752 | 15.27 | 0.23 | ||||
Ser | AGC | 935 | 3.80 | 0.06 | ||||
Lys | AAG | 2110 | 8.59 | 0.09 | ||||
Lys | AAA | 21721 | 88.38 | 0.91 | ||||
Asn | AAT | 13612 | 55.39 | 0.77 | ||||
Asn | AAC | 4161 | 16.93 | 0.23 | ||||
Met | ATG | 5660 | 23.03 | 1.00 | ||||
Ile | ATA | 7748 | 31.53 | 0.32 | ||||
Ile | ATT | 14701 | 59.82 | 0.60 | ||||
Ile | ATC | 1968 | 8.01 | 0.08 | ||||
Thr | ACG | 211 | 0.86 | 0.02 | ||||
Thr | ACA | 7243 | 29.47 | 0.55 | ||||
Thr | ACT | 5558 | 22.62 | 0.42 | ||||
Thr | ACC | 274 | 1.11 | 0.02 | ||||
Trp | TGG | 101 | 0.41 | 0.04 | ||||
Trp | TGA | 2489 | 10.13 | 0.96 | ||||
Cys | TGT | 1275 | 5.19 | 0.85 | ||||
Cys | TGC | 228 | 0.93 | 0.15 | ||||
End | TAG | 132 | 0.54 | 0.19 | ||||
End | TAA | 551 | 2.24 | 0.81 | ||||
Tyr | TAT | 7191 | 29.26 | 0.78 | ||||
Tyr | TAC | 1972 | 8.02 | 0.22 | ||||
Leu | TTG | 1765 | 7.18 | 0.08 | ||||
Leu | TTA | 15736 | 64.03 | 0.71 | ||||
Phe | TTT | 10293 | 41.88 | 0.81 | ||||
Phe | TTC | 2391 | 9.73 | 0.19 | ||||
Ser | TCG | 206 | 0.84 | 0.01 | ||||
Ser | TCA | 7413 | 30.16 | 0.46 | ||||
Ser | TCT | 3585 | 14.59 | 0.22 | ||||
Ser | TCC | 92.00 | 0.37 | 0.01 | ||||
Arg | CGG | 6 | 0.02 | 0.00 | ||||
Arg | CGA | 128.00 | 0.52 | 0.02 | ||||
Arg | CGT | 998 | 4.06 | 0.15 | ||||
Arg | CGC | 67.00 | 0.27 | 0.01 | ||||
Gln | CAG | 404 | 1.64 | 0.05 | ||||
Gln | CAA | 7058 | 28.72 | 0.95 | ||||
His | CAT | 2211 | 9.00 | 0.73 | ||||
His CAC 836.00 3.40 0.27 | Leu CTG 182.00 0.74 0.01 | Leu CTA 1690.00 6.88 0.08 | Leu CTT 2682.00 10.91 0.12 | Leu CTC 52.00 0.21 0.00 | Pro CCG 203.00 0.83 0.03 | Pro CCA 3516.00 14.31 0.57 | Pro CCT 2306.00 9.38 0.37 | Pro CCC 157.00 0.64 0.03
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