|
|
| Line 1: |
Line 1: |
| [[Image:Psb.jpeg|thumb|right|Chan Lee (an artistic interpretation)]]
| |
|
| |
|
| ==<span style="color:#0000ff"> '''Contact Information''' </span>==
| |
| [[Image:Psb.jpeg|thumb|right|Chan Lee (an artistic interpretation)]]
| |
| *[http://mayoresearch.mayo.edu/mayo/research/staff/wang_l21.cfm Wang Liguo Ph.D]
| |
| *[http://mayoresearch.mayo.edu/mayo/research/biostat/ Division of Biomedical Statistics and Informatics]
| |
| *[http://www.mayo.edu/ Mayo Clinic]
| |
| *Address: 200 First Street SW Rochester MN, 55905
| |
| *Email: wang.liguo AT mayo.edu
| |
|
| |
| ==<span style="color:#0000ff"> '''Education & Experience''' </span>==
| |
| <!--Include info about your educational background-->
| |
| * Postdoc Associate, 06/2008 - 06/2012 Division of Biostatistics and Informatics. Baylor College of Medicine
| |
| * Ph.D., Bioinformatics, Beijing Genomics Institute (BGI) Chinese Academy of Sciences, 2009
| |
| * M.S., Bioinformatics, Beijing Genomics Institute (BGI) Chinese Academy of Sciences, 2005
| |
| * B.S., Biotechnology, Xuzhou Normal University, Jiangsu 221116, China. 2003
| |
|
| |
| ==<span style="color:#0000ff"> '''Research interests''' </span>==
| |
| <!-- Feel free to add brief descriptions to your research interests as well -->
| |
| * Computational biology, Bioinformatics
| |
| * High throughput sequencing based data (RNA-seq, DNA-seq, Exome-Seq, ChIP-Exo, ChIP-seq, ChIP-chip, DNA methylation, Microarray) mining and analyses.
| |
| * Clinical data analyses.
| |
|
| |
| ==<span style="color:#0000ff"> '''Publications''' </span>==
| |
| * Rijnkels M, Freeman-Zadrowski C, Hernandez J, Potluri V, '''Wang L''', Li W, Lemay DG. Epigenetic modifications unlock the milk protein gene loci during mouse mammary gland development and differentiation. '''''PLoS One'''''. 2013; 8(1):e53270. Epub 2013 Jan 02. [http://www.ncbi.nlm.nih.gov/pubmed/23301053 PubMed]
| |
| * '''Wang L''', Park HJ, Dasari S, Wang S, Kocher JP, Li W. CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model. '''''Nucleic Acids Res''''' 2013 Jan 17. [http://www.ncbi.nlm.nih.gov/pubmed/23335781 PubMed]
| |
| * '''Wang L''', Wang S, Li W. RSeQC: Quality Control of RNA-seq experiments. '''''Bioinformatics''''' (2012) [http://www.ncbi.nlm.nih.gov/pubmed/22743226 PubMed]
| |
|
| |
| * Kannan K, '''Wang L (joint first author)''', et al. Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing. '''''PNAS''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21571633 PubMed]
| |
|
| |
| * Daines B, Wang H, '''Wang L (joint first author)''', et al. The Drosophila melanogaster transcriptome by paired-end RNA sequencing. '''''Genome Res''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21177959 PubMed]
| |
|
| |
| * Zhang C, '''Wang L (joint first author)''', et al. Definition of a FoxA1 Cistrome that is Crucial for G1-S Phase Cell- Cycle Transit in Castration-Resistant Prostate Cancer. '''''Cancer Res.''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21900400 PubMed]
| |
|
| |
| * Klisch T. J., Xi Y., Flora A., '''Wang L''', Li W, and Zoghbi H. Y. In vivo Atoh1 targetome reveals how a proneural transcription factor regulates cerebellar development. '''''PNAS''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21300888 PubMed]
| |
|
| |
| * Chen Z, '''Wang L (joint first author)''', Wang Q, and Li W. Histone modifications and chromatin organization in prostate cancer. '''''Epigenomics''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21318127 PubMed]
| |
|
| |
| * Lanz RB, Bulynko Y, Malovannaya A, Labhart P, '''Wang L''', Li W, Qin J, Harper M, O'Malley BW. Global Characterization of Transcriptional Impact of the SRC-3 Coregulator. Molecular Endocrinology. '''''Mol Endocrinol''''' (2010) [http://www.ncbi.nlm.nih.gov/pubmed?term=20181721 PubMed]
| |
| * '''Wang L''', Xi Y, Yu J, Dong L, Yen L, Li W. A Statistical Method for the Detection of Alternative Splicing Using RNA-Seq. '''''PLoS ONE''''' (2010) [http://www.ncbi.nlm.nih.gov/pubmed/20072613 PubMed]
| |
|
| |
| * '''Wang L''', Hao L, Li X, Hu S, Ge S & Yu J. SNP deserts of Asian cultivated rice: genomic regions under domestication. '''''J Evolution Biol.''''' (2009)[http://www.ncbi.nlm.nih.gov/pubmed?term=19243488 PubMed]
| |
| * Li X, Tan L, '''Wang L,''' Hu, S. & Sun, C. Isolation and characterization of conserved non-coding sequences among rice (Oryza sativa L.) paralogous regions. '''''Mol Genet Genomics''''' (2008) [http://www.ncbi.nlm.nih.gov/pubmed/18825415 Pubmed]
| |
| * Wang W, Meng B, Ge X, Song S, Yang Y, Yu X, '''Wang L.''', Hu S, Liu S, Yu J. Proteomic profiling of rice embryos from a hybrid rice cultivar and its parental lines. '''''Proteomics''''' (2008) [http://www.ncbi.nlm.nih.gov/pubmed/18850630 PubMed]
| |
|
| |
| ==<span style="color:#0000ff"> '''Software''' </span>==
| |
| * [http://code.google.com/p/rseqc/ RSeQC]: Quality Control of RNA-seq experiments
| |
| * [http://code.google.com/p/cpat/ CPAT]: Coding Potential Assessment Tool
| |
