LiguoWang: Difference between revisions

Revision as of 13:28, 2 July 2012

Postdoc Associate, 06/2008 - 06/2012 Division of Biostatistics and Informatics. Baylor College of Medicine
Ph.D., Bioinformatics, Beijing Genomics Institute (BGI) Chinese Academy of Sciences, 2009
M.S., Bioinformatics, Beijing Genomics Institute (BGI) Chinese Academy of Sciences, 2005
B.S., Biotechnology, Xuzhou Normal University, Jiangsu 221116, China. 2003

Field: Computational biology, Bioinformatics
Technologies: High-throughput sequencing. RNA-seq, ChIP-seq, DNA methylation, Microarray
Diseases: Prostate cancer/Breast cancer/Leukemia, heart disease,
Mechanism: Alternative splicing and diseases such as cancer.

Wang L, Wang S, Li W. RSeQC: Quality Control of RNA-seq experiments. Bioinformatics (2012) PubMed

Kannan K, Wang L (joint first author), et al. Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing. PNAS (2011) PubMed

Daines B, Wang H, Wang L (joint first author), et al. The Drosophila melanogaster transcriptome by paired-end RNA sequencing. Genome Res (2011) PubMed

Zhang C, Wang L (joint first author), et al. Definition of a FoxA1 Cistrome that is Crucial for G1-S Phase Cell- Cycle Transit in Castration-Resistant Prostate Cancer. Cancer Res. (2011) PubMed

Klisch T. J., Xi Y., Flora A., Wang L, Li W, and Zoghbi H. Y. In vivo Atoh1 targetome reveals how a proneural transcription factor regulates cerebellar development. PNAS (2011) PubMed

Chen Z, Wang L (joint first author), Wang Q, and Li W. Histone modifications and chromatin organization in prostate cancer. Epigenomics (2011) PubMed

Lanz RB, Bulynko Y, Malovannaya A, Labhart P, Wang L, Li W, Qin J, Harper M, O'Malley BW. Global Characterization of Transcriptional Impact of the SRC-3 Coregulator. Molecular Endocrinology. Mol Endocrinol (2010) PubMed
Wang L, Xi Y, Yu J, Dong L, Yen L, Li W. A Statistical Method for the Detection of Alternative Splicing Using RNA-Seq. PLoS ONE (2010) PubMed

Wang L, Hao L, Li X, Hu S, Ge S & Yu J. SNP deserts of Asian cultivated rice: genomic regions under domestication. J Evolution Biol. (2009)PubMed
Li X, Tan L, Wang L, Hu, S. & Sun, C. Isolation and characterization of conserved non-coding sequences among rice (Oryza sativa L.) paralogous regions. Mol Genet Genomics (2008) Pubmed
Wang W, Meng B, Ge X, Song S, Yang Y, Yu X, Wang L., Hu S, Liu S, Yu J. Proteomic profiling of rice embryos from a hybrid rice cultivar and its parental lines. Proteomics (2008) PubMed

RSeQC: Evaluate Experiment of RNA-seq. This package performs comprehensive quality control for your RNA-seq data

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 * Kannan K, '''Wang L (joint first author)''', et al. Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing. '''''PNAS''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21571633 PubMed]
-* Klisch T. J., Xi Y., Flora A., '''Wang L''', Li W, and Zoghbi H. Y. In vivo Atoh1 targetome reveals how a proneural transcription factor regulates cerebellar development. '''''PNAS''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21300888 PubMed]
 * Daines B, Wang H, '''Wang L (joint first author)''', et al. The Drosophila melanogaster transcriptome by paired-end RNA sequencing. '''''Genome Res''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21177959 PubMed]
 * Zhang C, '''Wang L (joint first author)''', et al. Definition of a FoxA1 Cistrome that is Crucial for G1-S Phase Cell- Cycle Transit in Castration-Resistant Prostate Cancer. '''''Cancer Res.''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21900400 PubMed]
+* Klisch T. J., Xi Y., Flora A., '''Wang L''', Li W, and Zoghbi H. Y. In vivo Atoh1 targetome reveals how a proneural transcription factor regulates cerebellar development. '''''PNAS''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed?term=21300888 PubMed]
 * Chen Z, '''Wang L (joint first author)''', Wang Q, and Li W. Histone modifications and chromatin organization in prostate cancer. '''''Epigenomics''''' (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21318127 PubMed]