Lidstrom:Sorvall Centrifuge: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
Line 31: Line 31:
*** (2) a matching black metal lid
*** (2) a matching black metal lid
*** (3) a metal rod with threads at one end and a knob on the other.   
*** (3) a metal rod with threads at one end and a knob on the other.   
** Place the based down, screw the lid on **counter clockwise** and then use the pin to secure it.  
** Place the based down, screw the lid on '''counter clockwise''' and then use the pin to secure it.  Try lifting to ensure you secured it correctly.  


[[image:GS-3 rotor speeds and k factors.png|thumb|upright=2.0|center|GS-34 rotor speeds and k factors]]
[[image:GS-3 rotor speeds and k factors.png|thumb|upright=2.0|center|GS-34 rotor speeds and k factors]]

Revision as of 10:38, 26 January 2015

Back to Protocols


Background

Lidstrom Sorvoll centrifuge

We have a Sorvoll RC-5B centrifuge that is useful for spinning large volumes in 0.5L bottles or medium-sized (a few mL) volumes very quickly

Rotors

Sorvall rotors


SS-34

  • Holds 8*50 mL, spins at 20,000 RPM/36,900 RCF
    • BUT Katya (circa 2010) recommends using it at <= 18,000 RPM
    • Tubes:
      SS-34 tubes
      • Can't be autoclaved.
        • Actually, Amanda might have autoclaved them before.
      • Can't write on body; can only write on cap. Sandy says stickers don't stick.
SS-34 rotor speeds and k factors

GS-3

  • GS-3.
    • BUT Katya (circa 2010) recommends using it at <= 7,500
    • For bigger bottles. (0.5L)
    • Holds eppendorf (1.5mL) tubes
  • Spins at 9,000 RPM/13,700 RCF
  • Requires 3 pieces for installation:
      • (1) the base that you put the filled bottles in
      • (2) a matching black metal lid
      • (3) a metal rod with threads at one end and a knob on the other.
    • Place the based down, screw the lid on counter clockwise and then use the pin to secure it. Try lifting to ensure you secured it correctly.
GS-34 rotor speeds and k factors

Explanation of RCF

RCF explanation
  • For reference, the benchtop 50mL centrifuges (e.g. ST-15R with a TX-400 swinging bucket rotor) we have spin at 4696 RCF.
  • There are stickers with maximum speeds. These were set by Katya, a Lidstrom Lab manager, circa 2011. It is unknown what the motivation was for keeping the rotors below maximum speed.
Lidstrom sorvoll speed instructions

Instructions

  1. pre-chill the rotor you plan to use (overnight in fridge)
  2. turn on centrifuge

Sample protocols

Example protocol for SIP3-4:

Janet's SIP3-4 centrifugation:

  • Chill to 4oC with SS-34 rotor inside
  • Fill correct tubes
  • Spin for ___ min at ___ RCF at ___oC

Example protocol for AM1:

Ask Nate/Ceci

Centrifugation Math & Basics

  • Sigma summary:
    • sedimentation rate is proportional to RFC, and proportional to the square of the particle diameter (cell diameter).
    • Stoke's equation
    • centrifugation speeds for applications